DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and hcn4l

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_684730.6 Gene:hcn4l / 556759 ZFINID:ZDB-GENE-110411-3 Length:1188 Species:Danio rerio


Alignment Length:760 Identity:359/760 - (47%)
Similarity:478/760 - (62%) Gaps:110/760 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 YSYPYHYAHHASSATAPANLKASLQLHSFGSHHPCPYPARPTSTSCTNSFNRRHIRRHKGKLGDR 618
            ||.|:.:.|..:......:.....:..|....|   :|: |:||..:           ||....:
Zfish    13 YSLPHQFGHKGAMNRDGEDSDKDTRRKSVKMKH---FPS-PSSTGSS-----------KGVCEAK 62

  Fly   619 LLSGDSEESVRCSYCSVLNVNDNDLRISFENTCTDSLVTAFD----DEALLICDQGTEMVHFDDV 679
              |||:|..|...:.:  |||.:..|.....:...|...|.|    ::..||.|...|    || 
Zfish    63 --SGDAETDVGRPFRT--NVNGDCRRFRGSLSSLTSRHAAPDADLAEQRRLIGDASPE----DD- 118

  Fly   680 SLYGTPKEEPMPN---------------------------------IPIVSEKVSANFLKSQLQS 711
                .|.|:|.|.                                 :|.......|.|:..|..:
Zfish   119 ----GPSEQPGPGESPGAQGGRGDGAQQAPSEEQSTFVKLEGIDQILPDDERMYQAGFMHRQFGA 179

  Fly   712 WFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAIS 776
            ..||..|:.::::|||.||:..|:.|.|::|.|:|||.|.|||||||.||||:|.||||:||.|:
Zfish   180 MLQPGVNKFSLRMFGSEKAVEHEQERVKSAGFWIIHPYSDFRFYWDLIMLLLMVGNLIIIPVGIT 244

  Fly   777 FFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISS 841
            ||.|:.:..||.||.:|||.||:|:|:||||||:::|:.| :||||:.|...|||:||.:|.:||
Zfish   245 FFKDEHTPAWIVFNVVSDTFFLVDLVLNFRTGIVKEDSTE-IILDPQQIKVRYLRSWFAVDFLSS 308

  Fly   842 IPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYIL 906
            ||:|||||    |::.:..||.::   ..|||||:|..|:|||:||||||||:||:.||||::.:
Zfish   309 IPVDYIFL----IVETRIDSDFYK---TARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 366

  Fly   907 QNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPML 971
            .                              .::||..:||.|||.||||:.||.||||||||||
Zfish   367 T------------------------------YDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPML 401

  Fly   972 QGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYA 1036
            |.|||:.||:.|::....|.:|||:|||||||||||||||.:||..:||:|||:||||.||||||
Zfish   402 QDFPSDCWVAKNKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYA 466

  Fly  1037 LFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGKFFDEELILGE 1101
            :|:||||.||||||||||||:||.||||:||::.|||.||||||.:|:|||||||.||||.||||
Zfish   467 MFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGE 531

  Fly  1102 LSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQE 1166
            |:|.|||::|::|||.|||::|.|||||.|||:.::|||::|||||||.||:|||:|.||||||.
Zfish   532 LNEPLREEIISFNCRKLVATMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTVGKKMYFIQH 596

  Fly  1167 GVVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRK 1231
            ||: .|:..|...|.:|||||||||||||..||.|||||:|||.|:||||||||.||::||:||:
Zfish   597 GVL-TVLTKGSKETKISDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMRR 660

  Fly  1232 TMETVAAERLNKIGKNPNIMHQKDEQ------LSNPESNTITAVV 1270
            ..||||.:||::|||..:::..|.::      |:..|:..|..:|
Zfish   661 AFETVALDRLDRIGKRNSVLQHKVQRDLNSGVLNYQENEIIQQIV 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 16/41 (39%)
PLN03192 741..>1214 CDD:215625 282/472 (60%)
hcn4lXP_684730.6 None

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