DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and kcnh5a

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001263209.1 Gene:kcnh5a / 556304 ZFINID:ZDB-GENE-061106-2 Length:1093 Species:Danio rerio


Alignment Length:936 Identity:194/936 - (20%)
Similarity:322/936 - (34%) Gaps:338/936 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 EESVRCSYC-----------SVLNVNDNDLRISFENTCTDSLV------------------TAFD 660
            ::|..||:.           .|....||     :|:.|.:.|:                  ...|
Zfish    60 QKSSTCSFMYGELTDKKTIDKVRQTFDN-----YESNCFEVLLYKKNRTPVWLHMQVAPIRNEND 119

  Fly   661 DEALLICDQGTEMVHFDDVSLYGTPKEE---------------------------PMPNIPIVSE 698
            ...|.:|.       |.|::::..|.|:                           || |...||.
Zfish   120 KVVLFLCT-------FKDITVFKQPIEDETTRGWTKFARLTRALTNSRGTVQQLTPM-NKTEVSH 176

  Fly   699 KVSANFLKSQLQSWFQPTDNRLAMKL-FGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLL 762
            |.|                 |||..| .||......::...||..|.::|.| :|:..||..:|:
Zfish   177 KHS-----------------RLAEALQLGSDILPQYKQEAPKTPPHIILHYC-TFKTTWDWVILI 223

  Fly   763 LLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAK 827
            |.....|::|..:||.....:..|:..:.:.|.|||:|||:||.|..:....  :||.|||||..
Zfish   224 LTFYTAIMVPYNVSFKTKQNNLVWLVLDSVVDVIFLVDIVLNFHTTFVGPGG--EVISDPKLIRM 286

  Fly   828 HYLRTWFFLDLISSIPLDYIFLIFNQIMKLQD--FSDSFQILH---AGRALR------------I 875
            :||:|||.:||:|.:|.|    |.|....:.:  |.||..:.|   ||.:.|            :
Zfish   287 NYLKTWFVIDLLSCLPYD----IINAFENVDEDTFVDSSAVGHLPSAGHSPRNATRAEDSVLPGL 347

  Fly   876 LRLAKLLSLVRLLRLSRLVR----YVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILK 936
            ..|...|.:||||||.|:.|    |:.....|.:|                              
Zfish   348 SSLFSSLKVVRLLRLGRVARKLDHYLEYGAAVLVL------------------------------ 382

  Fly   937 FLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSI----------NELQESYWL 991
                         |:|:..|:.||..|:              |.||          |.|:...||
Zfish   383 -------------LVCVFGLVAHWLACI--------------WYSIGDYEVIDEATNSLKTDSWL 420

  Fly   992 EQ----------------------------YSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSM 1028
            .|                            |..:|:..|:.:..||:|...|.:..:...::..|
Zfish   421 YQLAISIGTPYRYNASGSGHWEGGPSKHTLYISSLYFTMTSLTTIGFGNIAPTTDGEKIFSVAMM 485

  Fly  1029 ISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKF 1092
            :.|:..||...|:.|.:.|.:.::..:|.|.:..|.:::...::|:.:.:|:.:|....: ..|.
Zfish   486 MVGSLLYATIFGNVTTIFQQMYTNTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWAMTKG 550

  Fly  1093 FDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTI 1157
            .|.|.:|....:.:|.|:..:..|.:....|.|..|....:..:..:.:.....|||:|...|..
Zfish   551 IDTEKVLSICPKDMRADICVHLNRQVFNEHPAFRLASDGCLRSLAVEFQTTHCAPGDLIFHAGES 615

  Fly  1158 GTKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLLTN--ARRVASVRAETYCNLFSLSVDHFN 1220
            ...:.|:..|.::::. :.||...|..|..||::....:  |...|:|||.|||:|..:..|...
Zfish   616 VDTLCFVVSGSLEVIQ-DDEVIAILGKGDVFGDVFWKESSLAHACANVRALTYCDLHVIRRDALL 679

  Fly  1221 CVLDQYP--------------------LMRKTMETVAAERLNKIGKN------------------ 1247
            .||:.|.                    :.||..:....|...:..||                  
Zfish   680 KVLEFYTAFANSFSRNLILTCNLRKRIVFRKIADVKKEEEERRHQKNEVTLSIPVDHPVRKLFQK 744

  Fly  1248 -----------PN-----------------IMHQKDEQLSNPE---------------------- 1262
                       |:                 :.||..:|...|:                      
Zfish   745 FKQQKEMRTQGPSQYDLERNQFQVEHHLHPLSHQLHQQQYQPQYQGHHSLPHQHVAPMQNGAPGS 809

  Fly  1263 -----------SNTITAVVNALA-AEADDCK----DDDMDLKENLLHGSESS----IAEPVQTIR 1307
                       .:.||.:.:||| |:.::..    .:.|:||.|.  |:|.|    :..||    
Zfish   810 GNGNGGSCVVTVSQITPIQSALAYAQTEETNMSEGHEAMELKPNF--GAEDSNCLKVTSPV---- 868

  Fly  1308 EGLPRPRSGE------FRALFEGNTP 1327
                :||:|:      |..:..|::|
Zfish   869 ----KPRAGKGRGWMRFHNIASGSSP 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 11/42 (26%)
PLN03192 741..>1214 CDD:215625 128/534 (24%)
kcnh5aNP_001263209.1 PAS_9 39..132 CDD:463873 14/83 (17%)
PLN03192 217..>648 CDD:215625 115/494 (23%)
cyc_nuc_ocin <606..705 CDD:274839 25/99 (25%)

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