DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CG6026

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster


Alignment Length:691 Identity:141/691 - (20%)
Similarity:222/691 - (32%) Gaps:187/691 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NDQRASRDNLCPDNQQQQQQRHSHSHQHLVRQSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQ 85
            |.|...:..|..:.|||.|::....||....|....|...|..      .:.|.:...|:|:||.
  Fly   383 NTQAEEQQQLQLEKQQQMQKQQQIQHQQYQEQQQQQLYEQQQY------QLQLEKQHLDKQKHPY 441

  Fly    86 QPHL-----QQQQQQQQHLQQQ------------------QQRHRSSSSRLSTSGISKQNSSDSR 127
            |..|     |||||||||.|||                  ||:|:............:|..|..:
  Fly   442 QQQLEKQQQQQQQQQQQHHQQQHQQQHQQQQHQQHQQQHIQQQHQHQQQHQPLPPTLQQQPSPPK 506

  Fly   128 SGLRILDSSHSPVSCGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQLAQTE 192
            ..:.:.|..:| ::....:|:....|:..:||               ..:|:      |.:|.::
  Fly   507 PPMTLSDIFNS-LAEEESNVAQNYQQNQGFDA---------------QGNLI------QPIAPSK 549

  Fly   193 PDP----EPDPERD--RDRDRDRDRDRERERRHLTNLNLNLSSEY-DYSGSDKQQL--------V 242
            |.|    :|..::.  ..:.....|....|::.::....|.|:|| .|.......:        :
  Fly   550 PSPFAMQQPGTQQQPGTQQPAPHQRPSPNEQKVISGSQENYSNEYVSYQVQQPNMMQYRPVPGQI 614

  Fly   243 NETYIFKCIANSP-----SFLRTNKIKEQSKKLRNLSLKTRTAK-----KKGQIISKS----NAV 293
            |...|      ||     ||:..:::::.|....::..:...||     :.||:|::.    ...
  Fly   615 NNVVI------SPGQQSASFVLGSQVQQVSVGHPSIEKEPLFAKDTPGVQYGQVINEDIGNIKRP 673

  Fly   294 SDNSLHPGDKYLNLYLVEKKHSLQPQVASTSSSINTTHPQASSAPASSSSTCTKAPQLPALSAVA 358
            ....|.|...:..:          |.:...|:.....:...|.||.:.|.. ...|:.|      
  Fly   674 LKEPLPPPPNFQQM----------PSIQQNSNFHQNGNVATSGAPGTISYQ-EPPPEAP------ 721

  Fly   359 ARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTIPATGKSPPVPHSLAAKIS 423
            ...|||.|.||.|              .|..:...:.|.   .||:.|....|.|........:.
  Fly   722 TPYQQLPLIGSNK--------------RPSKKPVTKPEQ---PSHSYPPQQSSTPQKPQPTPPVL 769

  Fly   424 SSASGSKNCNLLSASSNSCHKLNAHAQGSGAGSGSGSGSGSGPPGHSHYAAASPKSSVSSNGHLN 488
            .....:|.   |..|:|    :...|||..:.....|....|||       |.|    :.|||..
  Fly   770 MQGEDTKE---LLVSTN----IRFPAQGEESLEPPSSAVMQGPP-------AGP----NINGHAQ 816

  Fly   489 KYCLTDL-TRRKAEFNRQL------SAPTDYTHHSSSNGSQQEGSSE---ANEGHEPVGE----- 538
            ...|..: ......|.:.:      ||......|...|.|||:...:   ...|.:|..|     
  Fly   817 PLSLQQIQNSNPVVFPKPMDEVVPGSASVQIQQHEVLNLSQQKQPLKFPAQQPGEQPSLEMEPPP 881

  Fly   539 ---STITVASA---------GVSYPHPYSYPYHYAHHASSATAPANLKASLQLH----SFGSHHP 587
               :|:.||.|         |.|  .|.::...|.....:...|:||...|...    ...|.||
  Fly   882 RYPTTVPVAHAPPTPGKRPLGTS--PPSNFYNEYNRKPQNGPRPSNLPNILPQFRPNAKISSGHP 944

  Fly   588 ----------------CPYPARPTSTSCTNSFNRRHIRRHK 612
                            .|.|.||.:.:....|..|....|:
  Fly   945 PALKQEPGNIRLPQQGGPGPKRPYNPAMQPQFAHRRQPLHQ 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630
PLN03192 741..>1214 CDD:215625
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 40/195 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.