DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and CG6026

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster


Alignment Length:691 Identity:141/691 - (20%)
Similarity:222/691 - (32%) Gaps:187/691 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NDQRASRDNLCPDNQQQQQQRHSHSHQHLVRQSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQ 85
            |.|...:..|..:.|||.|::....||....|....|...|..      .:.|.:...|:|:||.
  Fly   383 NTQAEEQQQLQLEKQQQMQKQQQIQHQQYQEQQQQQLYEQQQY------QLQLEKQHLDKQKHPY 441

  Fly    86 QPHL-----QQQQQQQQHLQQQ------------------QQRHRSSSSRLSTSGISKQNSSDSR 127
            |..|     |||||||||.|||                  ||:|:............:|..|..:
  Fly   442 QQQLEKQQQQQQQQQQQHHQQQHQQQHQQQQHQQHQQQHIQQQHQHQQQHQPLPPTLQQQPSPPK 506

  Fly   128 SGLRILDSSHSPVSCGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQLAQTE 192
            ..:.:.|..:| ::....:|:....|:..:||               ..:|:      |.:|.::
  Fly   507 PPMTLSDIFNS-LAEEESNVAQNYQQNQGFDA---------------QGNLI------QPIAPSK 549

  Fly   193 PDP----EPDPERD--RDRDRDRDRDRERERRHLTNLNLNLSSEY-DYSGSDKQQL--------V 242
            |.|    :|..::.  ..:.....|....|::.::....|.|:|| .|.......:        :
  Fly   550 PSPFAMQQPGTQQQPGTQQPAPHQRPSPNEQKVISGSQENYSNEYVSYQVQQPNMMQYRPVPGQI 614

  Fly   243 NETYIFKCIANSP-----SFLRTNKIKEQSKKLRNLSLKTRTAK-----KKGQIISKS----NAV 293
            |...|      ||     ||:..:::::.|....::..:...||     :.||:|::.    ...
  Fly   615 NNVVI------SPGQQSASFVLGSQVQQVSVGHPSIEKEPLFAKDTPGVQYGQVINEDIGNIKRP 673

  Fly   294 SDNSLHPGDKYLNLYLVEKKHSLQPQVASTSSSINTTHPQASSAPASSSSTCTKAPQLPALSAVA 358
            ....|.|...:..:          |.:...|:.....:...|.||.:.|.. ...|:.|      
  Fly   674 LKEPLPPPPNFQQM----------PSIQQNSNFHQNGNVATSGAPGTISYQ-EPPPEAP------ 721

  Fly   359 ARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTIPATGKSPPVPHSLAAKIS 423
            ...|||.|.||.|              .|..:...:.|.   .||:.|....|.|........:.
  Fly   722 TPYQQLPLIGSNK--------------RPSKKPVTKPEQ---PSHSYPPQQSSTPQKPQPTPPVL 769

  Fly   424 SSASGSKNCNLLSASSNSCHKLNAHAQGSGAGSGSGSGSGSGPPGHSHYAAASPKSSVSSNGHLN 488
            .....:|.   |..|:|    :...|||..:.....|....|||       |.|    :.|||..
  Fly   770 MQGEDTKE---LLVSTN----IRFPAQGEESLEPPSSAVMQGPP-------AGP----NINGHAQ 816

  Fly   489 KYCLTDL-TRRKAEFNRQL------SAPTDYTHHSSSNGSQQEGSSE---ANEGHEPVGE----- 538
            ...|..: ......|.:.:      ||......|...|.|||:...:   ...|.:|..|     
  Fly   817 PLSLQQIQNSNPVVFPKPMDEVVPGSASVQIQQHEVLNLSQQKQPLKFPAQQPGEQPSLEMEPPP 881

  Fly   539 ---STITVASA---------GVSYPHPYSYPYHYAHHASSATAPANLKASLQLH----SFGSHHP 587
               :|:.||.|         |.|  .|.::...|.....:...|:||...|...    ...|.||
  Fly   882 RYPTTVPVAHAPPTPGKRPLGTS--PPSNFYNEYNRKPQNGPRPSNLPNILPQFRPNAKISSGHP 944

  Fly   588 ----------------CPYPARPTSTSCTNSFNRRHIRRHK 612
                            .|.|.||.:.:....|..|....|:
  Fly   945 PALKQEPGNIRLPQQGGPGPKRPYNPAMQPQFAHRRQPLHQ 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597
Ion_trans 771..1054 CDD:278921
Crp 1118..>1241 CDD:223736
CAP_ED 1124..1233 CDD:237999
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 40/195 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445370
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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