DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and sei

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster


Alignment Length:699 Identity:165/699 - (23%)
Similarity:272/699 - (38%) Gaps:176/699 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 PYPARPTSTSCTNSFNRRHIRRHKGKL--GDRLLSGDSEESVRCSY------------------- 632
            |..::|:......|| ::.|:..|.||  .:..:|...|..:.|||                   
  Fly   178 PLESKPSQHKKQKSF-KKCIKCDKKKLYIKNYQVSARRECDLLCSYDPLRKNNADLFQTHKGTSY 241

  Fly   633 -CSVLNVNDNDLRISFENTCTDSLVTAFDDEALLICDQGTEMVHFDDVSLYGTPKEEPMPNIPIV 696
             |...|:..|......:|...:|.....|.||||                 |: |.||....|  
  Fly   242 ECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALL-----------------GS-KSEPKGQDP-- 286

  Fly   697 SEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCML 761
                                 |.:...|.|:  .|:.::::......|.:...|.|:..||..:|
  Fly   287 ---------------------NDMITSLGGN--ILLDQKLQNNYYHKWTLLHYSPFKAVWDWIIL 328

  Fly   762 LLLVANLIILPVAISFF--NDDLSTR---------WIAFNCLSDTIFLIDIVVNFRTGIMQQDNA 815
            :|::...|..|...:|.  ..|...|         .:..:.:.|..|::||::||||..:  ::.
  Fly   329 ILVMYTAIFTPYVAAFLLGEQDYQRRNSKYINSDPIVIIDLIVDVTFIVDIIINFRTTFV--NSQ 391

  Fly   816 EQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAK 880
            ::|:..|..||.|||..||.:||::::|.|.:.:          .||:.:         ...|..
  Fly   392 DEVVSHPGRIAVHYLSGWFLIDLVAAVPFDLLLV----------GSDTDE---------TTTLIG 437

  Fly   881 LLSLVRLLRLSRLVRYVSQWEE----VYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMA 941
            ||...|||||.|:.|.:.::.|    |.||                                   
  Fly   438 LLKTARLLRLVRVARKIDRYSEYGAAVLIL----------------------------------- 467

  Fly   942 SVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSIN---------ELQESYW------- 990
                    |:...:||.||..|:.:.:    |....|..|.|         ::||.|:       
  Fly   468 --------LMATFILIAHWLACIWYAI----GNAEKSIASKNIGWLNSLAYDIQEPYFDNRTGGP 520

  Fly   991 --LEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSR 1053
              ..:|..||:...:.:..:|:|...|.:..:...|:..|:.|:..||...|:.:.:||.|.|..
  Fly   521 SIKSRYITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGT 585

  Fly  1054 RQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY---QGKFFDEELILGELSEKLREDVINYNC 1115
            .:|..::.:|.|::.:.::|..:|||:.|||:|.:   .|  .|...:|....|.|:.|:..:..
  Fly   586 ARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWTYTNG--IDMNSLLKGFPECLQADICLHLN 648

  Fly  1116 RSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVAT 1180
            |.|:.:...|:.|....:.....|.|.....||||::..|.:.|.:|||..|.::|..|...|..
  Fly   649 RKLLTTCAAFSEASPGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVVL 713

  Fly  1181 SLSDGSYFGE-ICLL-TNARRVASVRAETYCNLFSLSVDHFNCVLDQYP 1227
            ..:|  .||| .|:. |..:....|||.|||::..|..|....|||.||
  Fly   714 GKND--IFGENPCIYPTVGKSNGVVRALTYCDIHKLHRDDLLDVLDSYP 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 5/41 (12%)
Ion_trans 771..1054 CDD:278921 70/315 (22%)
Crp 1118..>1241 CDD:223736 37/112 (33%)
CAP_ED 1124..1233 CDD:237999 36/106 (34%)
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 65/290 (22%)
Ion_trans_2 <526..580 CDD:285168 13/53 (25%)
CAP_ED 657..767 CDD:237999 36/106 (34%)
Crp 666..>766 CDD:223736 34/97 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445387
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.740

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