DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CG42260

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster


Alignment Length:1271 Identity:285/1271 - (22%)
Similarity:451/1271 - (35%) Gaps:383/1271 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SSSSRLSTSGISKQNSSDSRSGLRILDSSHSPVSCGTQS---------VSSTGGQSALYDACHEY 163
            |::.||..|...::||..:.:     .||...||.||..         ||.||..|      |.:
  Fly     2 STAKRLVLSLRGRKNSQGNSA-----TSSTRLVSAGTSPGHELDEIAVVSGTGSSS------HHF 55

  Fly   164 SRSLSAAAAEGAASLLKSHYSDQQLAQTEPDPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLS 228
              |.....|.|.|.|  ..||.............|.:.|.|.|.|...|......|:..      
  Fly    56 --SYGGCLATGDAPL--PRYSTAATPSLRRATAIDGDADADADADAGADGNDNENHVDG------ 110

  Fly   229 SEYDYSGSDKQQLVNETYIFKCIANSPSFLRTNKIKEQSKKLRN--LSLKTRTAKKKGQIISKSN 291
                ||..|..   :|.::....|.     :..|.:.|:....|  ...||..|.::....:|||
  Fly   111 ----YSDDDDD---DERWLRAARAQ-----KVQKAQTQAYAAHNDRPQTKTTVAIRQNNGSNKSN 163

  Fly   292 AVSDNSLHPGDKYLNLYLVEKKHSLQPQVASTSSSINTTHPQASSAPASSSSTCTKAPQLPALSA 356
            :.|::..:                      |:||:.|..:..|:::.::.:.........|.:  
  Fly   164 SNSNSKCN----------------------SSSSNNNNNYKSATTSQSNINHRLAPRASFPEI-- 204

  Fly   357 VAARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTI-PATGKSPPVPH---- 416
               .|.:|.|||.|           :...:|..|...|..    ||.:| |.|.....:..    
  Fly   205 ---MQPRLSLNGLL-----------NPSLMPSPRPLYRDH----SSRSINPLTAYEQQMAELDGS 251

  Fly   417 -------SLAAKISSSASGSKNCNLLSASSNSCHKLNAHAQGSG------AGSGSGSGSGS---- 464
                   .|.|.:..||.....|..|:....|... .|.|.|.|      .|.|.|||.|.    
  Fly   252 FYASNAGYLGAGMGGSAGDGTTCTNLTVGGGSTGG-GAMASGGGGTSAQVGGGGGGSGGGGAAIH 315

  Fly   465 -----------------------------------GPP--------GH---------SHYAAASP 477
                                               ||.        |.         ||.:.|:|
  Fly   316 TTELSITPTMAGDEQFIDLGSLRRFSIDRQSFLDLGPKFGMTQPKFGQSVSQQGFFTSHDSLATP 380

  Fly   478 KSSVSSNGHL-------NKYCLTDLTRRKAEFNRQLSAPTDYT-----HHSSSNGSQQE------ 524
            .:|.:||.|:       ....|.:..|.|:....:.:|..|..     :.|:..|||..      
  Fly   381 CASRASNSHMATVSTASEMDLLHNKQRNKSRGRLKTAASGDQPLLGTWNRSTGRGSQDNTLAGGG 445

  Fly   525 GSSEANEGHEPVGESTITVASAGVSYPHPYSYPYHYAHH--ASSATAPANLKASLQLHSFGSHHP 587
            .:|.|..||...|.:.......     :|.|......||  |..|..|..|:.|.   |..||||
  Fly   446 ATSLAMGGHNQYGGNYCNGTDR-----YPRSRSQQQGHHNAAQQAHHPYQLQHSA---STVSHHP 502

  Fly   588 ----CPYPARPTSTSCTNSFNRRHIRRHKGKLGDRLLSGDSEESVRCSYCSVLNVNDNDLRISFE 648
                .|....|......:..:..|  .|.|..|....||.....                     
  Fly   503 HAHGPPSQGGPGGPGPPHGGHPHH--PHHGGAGSGGGSGPGSHG--------------------- 544

  Fly   649 NTCTDSLVTAFDDEALLICDQGTEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWF 713
                                              |.|..:                         
  Fly   545 ----------------------------------GQPHHQ------------------------- 550

  Fly   714 QPTDNRLAMKLFGSRKALVKERIRQKTSG---HWVIHPCSSFRFYWDLCMLLLLVAN--LIILPV 773
            :|             :....:|||..|:.   |:|..|.....:||.:.:.:..:.|  :||...
  Fly   551 KP-------------RRTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRF 602

  Fly   774 AISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLR-TWFFLD 837
            |....|......|...:.|||.::||||:.:||||.: :|...|.  |...:..||:. |.|::|
  Fly   603 AFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRTGYL-EDGVLQT--DALKLRTHYMNSTIFYID 664

  Fly   838 LISSIPLDYIFLI--FNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQW 900
            .:..:|||:::|.  ||.|::      ||                     ||:::.|...::.:.
  Fly   665 CLCLLPLDFLYLSIGFNSILR------SF---------------------RLVKIYRFWAFMDRT 702

  Fly   901 EEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQ 965
            |......||.:.:|                                   ||..:|:|.||:|||.
  Fly   703 ERHTNYPNLFRSTA-----------------------------------LIHYLLVIFHWNGCLY 732

  Fly   966 FLVPMLQGFPSNSWV-----SINELQESYWLEQYSWALFKAMSHMLCIGYGRFP-PQSLTDMWLT 1024
            .::....||.|.:||     |.:.:::  :|:.|.|......:      .|..| |:|..:....
  Fly   733 HIIHKNNGFGSRNWVYHDSESADVVKQ--YLQSYYWCTLALTT------IGDLPKPRSKGEYVFV 789

  Fly  1025 MLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY- 1088
            :|.::.|...:|..|||..|::.|:.::|::::.|:..|:.||..|::|..::.::.::|::.: 
  Fly   790 ILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWL 854

  Fly  1089 QGKFFDEELILGELSEKLREDV-INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIII 1152
            ..|..|||..:..|.:||:.:: ||.:..:| ..|..|.|.::.|:.::|.:|:..:|.|||.|.
  Fly   855 TQKCSDEERAVSCLPDKLKAEIAINVHLDTL-KRVEIFQNTEAGFLCELVLRLRPVLFSPGDYIC 918

  Fly  1153 KEGTIGTKMYFIQEGVVDIVMANGE-VATSLSDGSYFGEICLL----TNARRVASVRAETYCNLF 1212
            ::|.:|.:||.:..|.:.:|..||: |..||..|||||||.:|    ...||.||||:..|.:||
  Fly   919 RKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYSDLF 983

  Fly  1213 SLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNP 1248
            .||......||.:||..|..:|::|.:||.|..|.|
  Fly   984 VLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAP 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 8/44 (18%)
Ion_trans 771..1054 CDD:278921 68/291 (23%)
Crp 1118..>1241 CDD:223736 49/127 (39%)
CAP_ED 1124..1233 CDD:237999 45/113 (40%)
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 73/310 (24%)
CAP_ED 890..1004 CDD:237999 45/113 (40%)
DUF4655 1084..>1154 CDD:317882
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I4624
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.