DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CngB

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster


Alignment Length:1163 Identity:235/1163 - (20%)
Similarity:410/1163 - (35%) Gaps:360/1163 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 SFLRTNKIKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSDNSLHPGDKYLNLYLVEKKHSLQPQV 320
            |..|..|:..||:||.        .:....::..|..:.:|.     .|.....::..|.|..::
  Fly     3 SMARFRKVNRQSEKLE--------PEASASLLKSSPNILENF-----AYDEFQPIQTNHPLLKRM 54

  Fly   321 ASTSSSINTTHPQA-SSAPASSSSTCTKAPQLPALSAVAARQQQLLLNGSLKGKGQSQSQGQSRQ 384
            |:|        |.| |.:.:|||||.:.....|.......|      :..::.....|.:...|.
  Fly    55 ATT--------PVAQSGSQSSSSSTSSTRKAEPKFCDTLER------HAFMRNVINQQPESTRRY 105

  Fly   385 TLPGHR-ASVRSESGSGSSHTIPATGKSPPVPHSLAAKISSSASGSKNC---------NLLSASS 439
            :.||.: |.||.     |...|....|          :|....|.::..         .:.|...
  Fly   106 STPGEKEAQVRR-----SLEEITKDLK----------EIEQFVSATEELMQREKEQEQMMYSNKE 155

  Fly   440 NSC--------HKLNAHAQGSGAGSGSGSGSGSGPPGHSHYAAASPKSSVS----SNGHLNKYCL 492
            |.|        :|:||:               ..||  ..:...||:...|    .||.:.  |:
  Fly   156 NKCPSPVKRVTYKINAY---------------KAPP--RRHRPGSPRFYHSRLYFRNGKIG--CV 201

  Fly   493 TDLTRRKAEFNRQLSAPTDYTHHSSSNGSQQEGSSEANEGHEPVGESTITVASAGVSYPHPYSYP 557
                              |.|.|.::.|:                               .::..
  Fly   202 ------------------DSTEHQNNVGA-------------------------------THALV 217

  Fly   558 YHYAHHASSATAPANLKASLQLHSFGSHHPCPYP-ARPTSTSCTNSFNRRHIRRHKGKLGDRLLS 621
            .|..||.....:|.:::..|:..||   ...|.| |.|.......:..|  ........|..:|.
  Fly   218 KHILHHEKPLVSPDSVRRVLEQDSF---EMVPLPGAVPEIVPDPIAIQR--AEELAAATGQVVLP 277

  Fly   622 GDSEESVRCSYCSV------LNVNDNDLRISF----------ENTCTDSLVTAFDDEALLICDQG 670
            .:.||..:.|....      ::.::.|::|.:          .|..|....:..:.|.:.:.:..
  Fly   278 KEEEEEEKSSPLHQVESQPDVDEDEQDVQICYNESPELQNEDRNERTQRTPSINESEIVAVDEPD 342

  Fly   671 TEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKER 735
            |||         .:..:...|:        ||..|.||.|.:.:.....| ::.|.:|...||.|
  Fly   343 TEM---------NSDVDHRKPS--------SAGSLDSQGQQFLRDQVRHL-VRRFTARANKVKSR 389

  Fly   736 IR---QKTSGHWV----------IHP--------------------------------CSSF--- 752
            |.   ..:|...|          :||                                |||.   
  Fly   390 IELPPTPSSSSTVSSPSPPPTKSLHPSPQHKVRLVPAGQSPHRGRLFEADTPRSNVWLCSSLCGA 454

  Fly   753 -----------RFY--WDLCML-LLLVANLIILPVAISF-FNDDLSTR-WIAFNCLSDTIFLIDI 801
                       :.|  | ||:: |..:.|..::|:..|| |....:|. |:|.:..:|.|:|:|:
  Fly   455 NNDERTLDPQGKIYISW-LCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCADIIYLLDV 518

  Fly   802 VVNFRTGIMQQDNAEQVILDPKLIAKHYLR-TWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQ 865
            |. |:..:|.......| .:..|..|:|:| ..|.|||::.:||:.::.                
  Fly   519 VF-FKHRVMYLFEGFWV-KNKNLTRKNYMRKLQFKLDLLALLPLELLYF---------------- 565

  Fly   866 ILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTK 930
                          ||.:....||..|..:..|.||...:|        ||              
  Fly   566 --------------KLGTQAVWLRFPRFFKIQSFWEVFRLL--------DR-------------- 594

  Fly   931 SNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESYWLEQYS 995
                   :..:..|:|:...:..||.:.|.:..|.:.....||...|.||               
  Fly   595 -------VISSPHFVRVAKTLTYMLYMIHITAALYYAYSDYQGLGQNRWV--------------- 637

  Fly   996 WALFKAMSH--MLCIGY--------GRFP-PQSLTDMWLTMLSMISGATCYALFLGHATNLIQSL 1049
               |....|  :.|..:        |:.| |:...:.....::.:.|...:||.:|...::|.:.
  Fly   638 ---FSGKGHPYVRCFAFATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTA 699

  Fly  1050 DSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKFFDEELILGELSEKLREDV-IN 1112
            ..::.:||:...:..|||....|.::::.|:..:|:..: |.:..||..||..|...|:.|: |:
  Fly   700 TRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKMWFQFTWEQQRTLDESNILDALPINLKTDIAIS 764

  Fly  1113 YNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIV--MAN 1175
            .:.::| :.|..||:.:...:.|:|.||:...|.|||.:.::|.:|.:||.::.|.|.::  .::
  Fly   765 VHIQTL-SKVQLFADCEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIVKLGQVQVMGGPSS 828

  Fly  1176 GEVATSLSDGSYFGEICLL-TNA--RRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVA 1237
            ..|..:|::||.||||.|| .|.  ||.|.||::.|.|||.||....|.|:..||..:..::..|
  Fly   829 DVVLATLTEGSVFGEISLLGINGADRRTADVRSKGYSNLFVLSKSDLNEVIAYYPTAQAILKKRA 893

  Fly  1238 AERLNKIGKNPNIMHQKDEQ-------------LSNPES-----NTITAVVNALAAEA 1277
            .:.:.|     |...:::|:             :.||::     ..:..|:.||..|:
  Fly   894 RQLMRK-----NAAREREEERERARSALQADVVIGNPKTPETAPKLLQTVIQALPFES 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 13/86 (15%)
Ion_trans 771..1054 CDD:278921 58/296 (20%)
Crp 1118..>1241 CDD:223736 45/127 (35%)
CAP_ED 1124..1233 CDD:237999 42/113 (37%)
CngBNP_611607.2 Ion_trans 488..704 CDD:278921 57/294 (19%)
DUF4105 <672..755 CDD:290123 19/82 (23%)
Crp 769..>898 CDD:223736 45/129 (35%)
CAP_ED 775..889 CDD:237999 42/113 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445371
Domainoid 1 1.000 45 1.000 Domainoid score I4624
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.850

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