DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Elk

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster


Alignment Length:670 Identity:146/670 - (21%)
Similarity:279/670 - (41%) Gaps:146/670 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 QLQSWFQP------TDNRLAMKLFGSRKALVKERIRQKTSGHWVIHP-CSSFRFYWDLCMLLLLV 765
            ||...::|      |..:|......|.:|...|...|......:|.| ...|:..||..:|:...
  Fly   215 QLSGHYKPEKGGVKTKLKLGNNFMHSTEAPFPEYKTQSIKKSRLILPHYGVFKGIWDWVILVATF 279

  Fly   766 ANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYL 830
            ...:::|...:|...|..|:  ..:.:.:.:|::||::||||..:.:..  :|:.:.|.||.:||
  Fly   280 YVALMVPYNAAFAKADRQTK--VSDVIVEALFIVDILLNFRTTFVSRKG--EVVSNSKQIAINYL 340

  Fly   831 RTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVR 895
            |.||.|||::::|.|:::     ...|.|..||.  :|            |:.|.|||||:||::
  Fly   341 RGWFALDLLAALPFDHLY-----ASDLYDGEDSH--IH------------LVKLTRLLRLARLLQ 386

  Fly   896 YVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHW 960
            .:.::.:                           .:.:||..|..:            ..|..||
  Fly   387 KIDRYSQ---------------------------HTAMILTLLMFS------------FTLAAHW 412

  Fly   961 SGCLQFLVPM--LQGFPSNS--WVSINELQESYWL------EQYSWALFKAMSHMLCIGYGRFPP 1015
            ..|:.:::.:  .:.||.::  |:.:...:::..:      |.||.||:...:.:..:|:|....
  Fly   413 LACIWYVIAVKEYEWFPESNIGWLQLLAERKNASVAILTTAETYSTALYFTFTSLTSVGFGNVSA 477

  Fly  1016 QSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRI 1080
            .:..:...|::.|:.||..:|:..|:.|.:||.:.|.|..|..|.:.:::::|...:|::::|||
  Fly   478 NTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRI 542

  Fly  1081 TEYFEHRYQ-GKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEV 1144
            .:||:..:. ....|....|.|..|:||.||..:..|.:: .:|.|..|....:..:...:|...
  Fly   543 EDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNF 606

  Fly  1145 FQPGDIIIKEGTIGTKMYFIQEGVVDI--------VMANGE----------VATSLSDGSYFGEI 1191
            ..||:.:|.:|.....:|::..|.:::        ::..|:          ||||      .|::
  Fly   607 CAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATS------NGQM 665

  Fly  1192 CLLTNA-------RRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNPN 1249
            ...||:       |..:.::|.|||:|..:.:.....||..||..::....             :
  Fly   666 TATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFAN-------------D 717

  Fly  1250 IMHQKD----EQLSNPESNTITAVVNALAAEADDCKDDDMD----LKENLLHGSESSIAEPVQTI 1306
            |.|...    |...|.:|:...:......:|.|:.:::..:    .|||  .|...|.|.|:..|
  Fly   718 IQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGKGEKEN--GGGPPSGASPLHNI 780

  Fly  1307 RE-----------GLPRPRS 1315
            ..           |:..||:
  Fly   781 SNSPLHATRSPLLGMGSPRN 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 10/48 (21%)
Ion_trans 771..1054 CDD:278921 66/292 (23%)
Crp 1118..>1241 CDD:223736 28/147 (19%)
CAP_ED 1124..1233 CDD:237999 27/133 (20%)
ElkNP_477009.1 PAS 36..132 CDD:238075
PAS_3 41..129 CDD:285623
Ion_trans 285..516 CDD:278921 66/292 (23%)
Ion_trans_2 <455..510 CDD:285168 14/54 (26%)
Crp 583..>650 CDD:223736 11/66 (17%)
CAP_ED 586..715 CDD:237999 27/134 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445389
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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