Protein Alignment Ih and Elk

DIOPT Version :10

• Sequence 1: NP_001033948.1
• Gene: Ih / 36589
• FlyBaseID: FBgn0263397
• Length: 1327
• Species: Drosophila melanogaster
• Sequence 2: NP_477009.1
• Gene: Elk / 37047
• FlyBaseID: FBgn0011589
• Length: 1284
• Species: Drosophila melanogaster
• Alignment Length: 670
• Identity: 146/670 - (21%)
• Similarity: 279/670 - (41%)
• Gaps: 146/670 - (21%)

  Fly   708 QLQSWFQP------TDNRLAMKLFGSRKALVKERIRQKTSGHWVIHP-CSSFRFYWDLCMLLLLV 765
            ||...::|      |..:|......|.:|...|...|......:|.| ...|:..||..:|:...
  Fly   215 QLSGHYKPEKGGVKTKLKLGNNFMHSTEAPFPEYKTQSIKKSRLILPHYGVFKGIWDWVILVATF 279

  Fly   766 ANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYL 830
            ...:::|...:|...|..|:  ..:.:.:.:|::||::||||..:.:..  :|:.:.|.||.:||
  Fly   280 YVALMVPYNAAFAKADRQTK--VSDVIVEALFIVDILLNFRTTFVSRKG--EVVSNSKQIAINYL 340

  Fly   831 RTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVR 895
            |.||.|||::::|.|:::     ...|.|..||.  :|            |:.|.|||||:||::
  Fly   341 RGWFALDLLAALPFDHLY-----ASDLYDGEDSH--IH------------LVKLTRLLRLARLLQ 386

  Fly   896 YVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHW 960
            .:.::.:                           .:.:||..|..:            ..|..||
  Fly   387 KIDRYSQ---------------------------HTAMILTLLMFS------------FTLAAHW 412

  Fly   961 SGCLQFLVPM--LQGFPSNS--WVSINELQESYWL------EQYSWALFKAMSHMLCIGYGRFPP 1015
            ..|:.:::.:  .:.||.::  |:.:...:::..:      |.||.||:...:.:..:|:|....
  Fly   413 LACIWYVIAVKEYEWFPESNIGWLQLLAERKNASVAILTTAETYSTALYFTFTSLTSVGFGNVSA 477

  Fly  1016 QSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRI 1080
            .:..:...|::.|:.||..:|:..|:.|.:||.:.|.|..|..|.:.:::::|...:|::::|||
  Fly   478 NTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRI 542

  Fly  1081 TEYFEHRYQ-GKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEV 1144
            .:||:..:. ....|....|.|..|:||.||..:..|.:: .:|.|..|....:..:...:|...
  Fly   543 EDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNF 606

  Fly  1145 FQPGDIIIKEGTIGTKMYFIQEGVVDI--------VMANGE----------VATSLSDGSYFGEI 1191
            ..||:.:|.:|.....:|::..|.:::        ::..|:          ||||      .|::
  Fly   607 CAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATS------NGQM 665

  Fly  1192 CLLTNA-------RRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNPN 1249
            ...||:       |..:.::|.|||:|..:.:.....||..||..::....             :
  Fly   666 TATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFAN-------------D 717

  Fly  1250 IMHQKD----EQLSNPESNTITAVVNALAAEADDCKDDDMD----LKENLLHGSESSIAEPVQTI 1306
            |.|...    |...|.:|:...:......:|.|:.:::..:    .|||  .|...|.|.|:..|
  Fly   718 IQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGKGEKEN--GGGPPSGASPLHNI 780

  Fly  1307 RE-----------GLPRPRS 1315
            ..           |:..||:
  Fly   781 SNSPLHATRSPLLGMGSPRN 800

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ih	NP_001033948.1	Ion_trans_N	709..751	CDD:400630	10/48 (21%)
		PLN03192	741..>1214	CDD:215625	115/509 (23%)
Elk	NP_477009.1	PAS_9	40..133	CDD:463873
		PLN03192	270..>650	CDD:215625	99/442 (22%)
		cNMP	586..716	CDD:197516	27/135 (20%)