DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Cngb1

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001182342.1 Gene:Cngb1 / 333329 MGIID:2664102 Length:1325 Species:Mus musculus


Alignment Length:705 Identity:163/705 - (23%)
Similarity:280/705 - (39%) Gaps:190/705 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   685 PKEEPMPNIPIVSEKVS-------------------ANFLK------SQLQSWFQPT-------- 716
            |.|.|.|: |:.|:.::                   |..||      |.:.:|..||        
Mouse   563 PPERPPPS-PVKSDTLTVPGAAAAGHRKKLPSQDDEAEELKALSPAESPVVAWSDPTTPQEADGQ 626

  Fly   717 --------------DNRL--AMKLFGSRKALVKERI-------------------------RQKT 740
                          ::||  .:|:|..|...|||::                         .||.
Mouse   627 DRAASTASQNSAIINDRLQELVKMFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPDPAQKP 691

  Fly   741 S-------GHWVIHPCSSFR---------------------FYWDLCMLLLLVANLIILPV--AI 775
            :       .|:....|..|:                     ..|...::|....|..::||  |.
Mouse   692 AEAEVAEEEHYCDMLCCKFKRRPLKMYRFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAF 756

  Fly   776 SFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT-WFFLDLI 839
            .:...|....|:..:.|.|.|:|:||.| |:.. :|......:|.|.|.:..:||:: .|.:||:
Mouse   757 PYQRADNIHFWLLMDYLCDFIYLLDITV-FQMR-LQFVKGGDIITDKKEMRNNYLKSRRFKMDLL 819

  Fly   840 SSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVY 904
            ..:|||:::|                               .|.:..||||.|.::|::.:|   
Mouse   820 CLLPLDFLYL-------------------------------KLGINPLLRLPRCLKYMAFFE--- 850

  Fly   905 ILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVP 969
                                     .:|.:...|:.|.|: |:......:|...|.:.||.:...
Mouse   851 -------------------------FNNRLEAILSKAYVY-RVIRTTAYLLYSLHLNSCLYYWAS 889

  Fly   970 MLQGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATC 1034
            ..||..|..|| .:.:..|| :..|.|    |:..::.|| |...||:|.::...:|:..:|...
Mouse   890 AFQGIGSTHWV-YDGVGNSY-IRCYYW----AVKTLITIG-GLPDPQTLFEIVFQLLNYFTGVFA 947

  Fly  1035 YALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGK-FFDEELI 1098
            :::.:|...:::.:..:.:..||..:....:||.:.|:||.::.|:..::|:.:..: ..||..:
Mouse   948 FSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQGMLDESEL 1012

  Fly  1099 LGELSEKLREDV---INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTK 1160
            :.:|.:|:|.|:   :||   |:|:.|..|...|...:.|::.:|:..|:.|.|.:.|:|.||.:
Mouse  1013 MVQLPDKMRLDLAIDVNY---SIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGRE 1074

  Fly  1161 MYFIQEGVVDIVMA-NGE-VATSLSDGSYFGEICLLT---NARRVASVRAETYCNLFSLSVDHFN 1220
            ||.||.|.|.::.. :|: |..:|..||.||||.||.   ..||.|:|.|..:.|||.|.....|
Mouse  1075 MYIIQAGQVQVLGGPDGKAVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLN 1139

  Fly  1221 CVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAA 1275
            .:|..||..:|.:...|...|.   .|.....:|...:..|.:.|......||||
Mouse  1140 EILVHYPESQKLLRKKARRMLR---NNNKPKEEKSVLILPPRAGTPKLFNAALAA 1191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 15/97 (15%)
PLN03192 741..>1214 CDD:215625 124/512 (24%)
Cngb1NP_001182342.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..124
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..198
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..279
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..637 13/74 (18%)
Calmodulin-binding CaM1. /evidence=ECO:0000250|UniProtKB:Q28181 633..643 0/9 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 659..694 4/34 (12%)
PLN03192 724..>1110 CDD:215625 111/457 (24%)
Ion conduction pathway. /evidence=ECO:0000250|UniProtKB:Q14028 862..961 26/106 (25%)
C-linker. /evidence=ECO:0000250|UniProtKB:Q14028 964..1040 20/78 (26%)
CAP_ED 1038..1147 CDD:237999 40/108 (37%)
cNMP-binding domain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00060 1038..1142 38/103 (37%)
Cyclic nucleotide-binding domain. /evidence=ECO:0000250|UniProtKB:Q14028 1044..1160 41/115 (36%)
Calmodulin-binding CaM2. /evidence=ECO:0000250|UniProtKB:Q28181 1224..1230
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1226..1325
Blue background indicates that the domain is not in the aligned region.

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