DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and Hcn4

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001074661.1 Gene:Hcn4 / 330953 MGIID:1298209 Length:1201 Species:Mus musculus


Alignment Length:986 Identity:397/986 - (40%)
Similarity:518/986 - (52%) Gaps:231/986 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 PASSSSTCTKAPQLPALSAVAARQQQLLLNGSLKGKG--QSQSQGQSR-QTLPGHRASVRSESGS 399
            |.|........||.....|....:::   :|..:|.|  |..|:...| :.||....||.:....
Mouse     5 PPSMRKRLYSLPQQVGAKAWIMDEEE---DGEEEGAGGRQDPSRRSIRLRPLPSPSPSVAAGCSE 66

  Fly   400 GSSHTIPATGKSPPVPHSLAAKISSSASGSKNCNLLSASSNSCHKLNAHAQGSGAGSGSGSGSGS 464
            .....:.||....|           ..|..|     |:::..|.:........|:..|...|:|.
Mouse    67 SRGAALGATESEGP-----------GRSAGK-----SSTNGDCRRFRGSLASLGSRGGGSGGAGG 115

  Fly   465 GPPGHSHYAAASPKSSVSSNGHLNKYCLTDLTRRKAEFNRQLSAPTDYTHHSSSNGSQQEGSSEA 529
            |                ||.|||:.         .||..|.::|               ||.:..
Mouse   116 G----------------SSLGHLHD---------SAEERRLIAA---------------EGDASP 140

  Fly   530 NEGHEPVGESTITVASAGVSYPHPYSYPYHYAHHASSATAPANLKASLQLHSFGSHHPCPYPARP 594
            .|...|.|.:|               .|...|..|..|.:|                |...|.:|
Mouse   141 GEDRTPPGLAT---------------EPERPATAAQPAASP----------------PPQQPPQP 174

  Fly   595 TSTSCTNSFNRRHIRRHKG-KLGDRLLSGDSEESVRCSYCSVLNVNDNDLRISFENTCTDSLVTA 658
            .|.||........|:...| ...|::|   .|..||..                           
Mouse   175 ASASCEQPSADTAIKVEGGAAASDQIL---PEAEVRLG--------------------------- 209

  Fly   659 FDDEALLICDQGTEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMK 723
                                                      .:.|::.|..:..||..|:.:::
Mouse   210 ------------------------------------------QSGFMQRQFGAMLQPGVNKFSLR 232

  Fly   724 LFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIA 788
            :|||:||:.:|:.|.|::|.|:|||.|.|||||||.||||:|.||||:||.|:||.|:.:|.||.
Mouse   233 MFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIV 297

  Fly   789 FNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQ 853
            ||.:|||.||||:|:||||||:.:||.| :||||:.|...||::||.:|.|||||:||||||   
Mouse   298 FNVVSDTFFLIDLVLNFRTGIVVEDNTE-IILDPQRIKMKYLKSWFVVDFISSIPVDYIFLI--- 358

  Fly   854 IMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRG 918
               ::...|| ::....|||||:|..|:|||:||||||||:||:.||||::.:.           
Mouse   359 ---VETRIDS-EVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT----------- 408

  Fly   919 RMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSIN 983
                               .::||..:||.|||.||||:.||.|||||||||||.||.:.|||||
Mouse   409 -------------------YDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSIN 454

  Fly   984 ELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQS 1048
            .:..:.|.:|||:||||||||||||||||..|..::|:||||||||.||||||:|:||||.||||
Mouse   455 GMVNNSWGKQYSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQS 519

  Fly  1049 LDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINY 1113
            ||||||||:||.||||:||::.|||.|.||||.:|:|||||||.||||.|||||||.|||::||:
Mouse   520 LDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINF 584

  Fly  1114 NCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEV 1178
            |||.||||:|.|||||.|||:.::|||::|||||||.||:|||||.||||||.|||. |:..|..
Mouse   585 NCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVS-VLTKGNK 648

  Fly  1179 ATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNK 1243
            .|.|:||||||||||||..||.|||||:|||.|:|||||:||.||::||:||:..||||.:||::
Mouse   649 ETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDR 713

  Fly  1244 IGKNPNIM-----HQKDEQLSNPESNTITAVVNALAAEADDCKDDDMDLKENLLHGSE-SSIAEP 1302
            |||..:|:     |..:..:.|.:.|.|                    :::.:.|..| :..|..
Mouse   714 IGKKNSILLHKVQHDLNSGVFNYQENEI--------------------IQQIVRHDREMAHCAHR 758

  Fly  1303 VQTIREGLPRP 1313
            ||......|.|
Mouse   759 VQAAASATPTP 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 16/41 (39%)
Ion_trans 771..1054 CDD:278921 155/282 (55%)
Crp 1118..>1241 CDD:223736 83/122 (68%)
CAP_ED 1124..1233 CDD:237999 74/108 (69%)
Hcn4NP_001074661.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..121 24/130 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..183 17/78 (22%)
Involved in subunit assembly. /evidence=ECO:0000250 209..260 18/119 (15%)
Ion_trans_N 218..260 CDD:285597 16/41 (39%)
Ion_trans 280..525 CDD:278921 155/282 (55%)
Crp 589..>724 CDD:223736 89/135 (66%)
CAP_ED 595..703 CDD:237999 74/108 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 804..902
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..1201
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3586
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000897
OrthoInspector 1 1.000 - - otm44108
orthoMCL 1 0.900 - - OOG6_101339
Panther 1 1.100 - - O PTHR45689
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8291
SonicParanoid 1 1.000 - - X717
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.840

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