DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Cngb3

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_038955.1 Gene:Cngb3 / 30952 MGIID:1353562 Length:694 Species:Mus musculus


Alignment Length:592 Identity:135/592 - (22%)
Similarity:248/592 - (41%) Gaps:123/592 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   686 KEEPMPNIPIVSE-KVSANFLKSQLQSWFQPTDNRLAMK------LFGSRKALVKERIRQKTSGH 743
            :||..|.:...|: .:|.|....|        :|...:|      .|..::..|||.:|:     
Mouse   144 EEENFPEVEASSQTAMSTNISPKQ--------ENNSKLKEHQDTFSFKPQRVPVKEHLRR----- 195

  Fly   744 WVIHPCSSFRFYWD----LCMLLLLVA---NLIILPVAISF--FNDDLSTRWIAFNCLSDTIFLI 799
             :|.| .|...|.|    |.:||:.:|   |..:|||.:.|  ...|....||..:.:.|.|:|.
Mouse   196 -MILP-RSIDSYTDRVYLLWLLLVTIAYNWNCWLLPVRLVFPCQTPDNKNYWIITDIVCDIIYLC 258

  Fly   800 DI-VVNFRTGIMQQDNAEQVILDPKLIAKHY-LRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSD 862
            || ::..|   :|.....::|:|...:.::| ..|.|.:|:.|.:|.:.:::.|           
Mouse   259 DILLIQPR---LQFVRGGEIIVDSNELKRNYRSSTKFRMDVASLLPFEVLYIFF----------- 309

  Fly   863 SFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDG 927
                                .:..:.|.:|:::|.|.:|..:.|:::..|               
Mouse   310 --------------------GVNPIFRANRILKYTSFFEFNHHLESIMDK--------------- 339

  Fly   928 LTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINE----LQES 988
                         |.|: |:......:|.:.|.:.|:.:.....:|..|..||...|    |:..
Mouse   340 -------------AYVY-RVIRTTGYLLFLLHINACVYYWASDYEGIGSTKWVYNGEGNKYLRCF 390

  Fly   989 YWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSR 1053
            ||          |:..::.|| |...||:..::....|:..||...::..:|...::|.:..:::
Mouse   391 YW----------AVRTLITIG-GLPEPQTSFEIVFQFLNFFSGVFVFSSLIGQMRDVIGAATANQ 444

  Fly  1054 RQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLREDV---INYN 1114
            ..::..:..:..||....:|:.::.|:..:.|:.:.. :..||..:|..|...::..:   ||: 
Mouse   445 NYFQACMDHIIAYMNKYSIPQSVQYRVRTWLEYTWNSQRILDESNLLENLPTAMQLSIALDINF- 508

  Fly  1115 CRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMA--NGE 1177
              |::..|..|...|:..:.|::.:||..::.|||.:.|:|.||.:||.|:.|.|.::..  ..:
Mouse   509 --SIIDKVELFKGCDTQMIYDLLLRLKSTIYLPGDFVCKKGEIGKEMYIIKHGEVQVLGGPDGAQ 571

  Fly  1178 VATSLSDGSYFGEICLLTNA---RRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAE 1239
            |..:|..||.||||.||...   ||.|.|.|..:.||.:|.......:|..||..:|.:...|..
Mouse   572 VLVTLKAGSVFGEISLLAKGGGNRRTADVVAHGFANLLTLDKKTLQEILLHYPTSKKLLMKKAKI 636

  Fly  1240 RLNKIGK 1246
            .|::.||
Mouse   637 LLSQKGK 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 9/47 (19%)
Ion_trans 771..1054 CDD:278921 55/290 (19%)
Crp 1118..>1241 CDD:223736 41/127 (32%)
CAP_ED 1124..1233 CDD:237999 39/113 (35%)
Cngb3NP_038955.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..177 8/38 (21%)
Ion_trans 228..445 CDD:278921 55/290 (19%)
Crp 510..>640 CDD:223736 42/129 (33%)
CAP_ED 516..624 CDD:237999 36/107 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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