DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Cnga4

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001028489.1 Gene:Cnga4 / 233649 MGIID:2664099 Length:575 Species:Mus musculus


Alignment Length:636 Identity:156/636 - (24%)
Similarity:267/636 - (41%) Gaps:143/636 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   744 W--VIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLS----TRWIAFNCLSDTIFLIDIV 802
            |  |:.|...:.::|...|:..::.||||:.....|  .||.    ..|...:..||.::|:||.
Mouse    23 WLPVLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACF--PDLQHSYLVAWFVLDYTSDLLYLLDIG 85

  Fly   803 VNFRTGIMQQDNAEQVILDPKLIAKHYLRTW-FFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQI 866
            |.|.||.::|.   .:::|..:||..|:||| |.|||.|.:|.|..:                  
Mouse    86 VRFHTGFLEQG---ILVVDKSMIASRYVRTWSFLLDLASLVPTDAAY------------------ 129

  Fly   867 LHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKS 931
            :..|..:..|||.      |.||:.||.....:.|......|.                      
Mouse   130 VQLGPHIPTLRLN------RFLRVPRLFEAFDRTETRTAYPNA---------------------- 166

  Fly   932 NLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESY--WLEQY 994
                         .||..|:..:.::.||:.||.|.:....||..::||..:..|..:  ...||
Mouse   167 -------------FRIAKLMIYIFVVIHWNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQY 218

  Fly   995 SWALFKAMSHMLCIGYGRFPPQSLTDMWLTML-SMISGATCYALFLGHATNLIQSLDSSRRQYRE 1058
            .::.:  .|.::....|..|..:..:.:|.|: ..:.....:|..:|..:::|.:::::...:..
Mouse   219 LYSFY--FSTLILTTVGDTPLPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYP 281

  Fly  1059 KVKQVEEYMAYRKLPRDMRQRITEYFEH-RYQGKFFDEELILGELSEKLREDVINYNCRSLVASV 1122
            ....|::||..:.:.|.:.:|:.::::| :...|..:|..||..|.|:||.:|......|.::.|
Mouse   282 DHALVKKYMKLQHVNRRLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRV 346

  Fly  1123 PFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATS-LSDGS 1186
            ..|.|.:::.:.::|.||:.:.:.||:.:.::|.||.:||.|:||.:.:|..:|....: |..|.
Mouse   347 QIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYAVLGAGL 411

  Fly  1187 YFGEICL------LTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIG 1245
            |||||.:      ::..||.|::::..|.:||.||.:....||.:||..:..||....|.|.|:.
Mouse   412 YFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQAVMEEKGREILLKMN 476

  Fly  1246 KNPNIMHQKDEQLSNPESNTITAVVNALAAEAD------------DCKDDDMDLK-ENLLHGSES 1297
            |                     ..|||.|||..            |.:.||:..| ..||...||
Mouse   477 K---------------------LDVNAEAAEIALQEATESRLKGLDQQLDDLQTKFARLLAELES 520

  Fly  1298 S---IAEPVQTI----REGLPRP-----------------RSGEFRALFEG 1324
            |   ||..::.:    || .|.|                 :.||.:|..||
Mouse   521 SALKIAYRIERLEWQTRE-WPMPDDMGEADDEAEPGEGTSKDGEEKAGQEG 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 3/8 (38%)
Ion_trans 771..1054 CDD:278921 62/290 (21%)
Crp 1118..>1241 CDD:223736 40/129 (31%)
CAP_ED 1124..1233 CDD:237999 36/115 (31%)
Cnga4NP_001028489.1 Ion_trans 34..273 CDD:366146 68/304 (22%)
IQ-type. /evidence=ECO:0000250 292..302 1/9 (11%)
CAP_ED 348..464 CDD:237999 36/115 (31%)
CLZ 464..534 CDD:374604 23/90 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..575 9/36 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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