DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Kcnh8

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_036016335.1 Gene:Kcnh8 / 211468 MGIID:2445160 Length:1103 Species:Mus musculus


Alignment Length:644 Identity:145/644 - (22%)
Similarity:271/644 - (42%) Gaps:140/644 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   718 NRLAM--KLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFF-N 779
            |:|.:  .:|..:.|..:.::.......:::...|:|:..||..:||......:.:|..:.|. |
Mouse   184 NKLKINNNVFVDKPAFPEYKVSDAKKSKFILLHFSTFKAGWDWLILLATFYVAVTVPYNVCFIGN 248

  Fly   780 DDLSTRWIAFNCLSD----TIFLI-DIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLI 839
            :||||  .....:||    .:|:| ||::||||..:.:..  |||.:.:.|..||:.|||.:|||
Mouse   249 EDLST--TRSTTVSDIAVEILFIIADIILNFRTTYVSKSG--QVIFEARSICIHYVTTWFIIDLI 309

  Fly   840 SSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVY 904
            :::|.|.:: .||                    :.::.|..||..||||||.||           
Mouse   310 AALPFDLLY-AFN--------------------VTVVSLVHLLKTVRLLRLLRL----------- 342

  Fly   905 ILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVP 969
             ||.|.:.|               ..|.::|..            |:.|..|:.||..|:.:::.
Mouse   343 -LQKLDRYS---------------QHSTIVLTL------------LMSMFALLAHWMACIWYVIG 379

  Fly   970 MLQGFPSNS---WVSINELQESYWLEQ-----------------------YSWALFKAMSHMLCI 1008
            .::. ..||   |       |..||.:                       |..||:..:|.:..:
Mouse   380 KMER-EDNSLLKW-------EVGWLHELGKRLESPYYGNNTLGGPSIRSAYIAALYFTLSSLTSV 436

  Fly  1009 GYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLP 1073
            |:|.....:..:...::.:|:.||..:||..|:.|.:||.:.|....|..:.|.:::::....||
Mouse   437 GFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLKDFIRVHHLP 501

  Fly  1074 RDMRQRITEYFEHRYQ-GKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVV 1137
            :.::||:.|||:..:. ....|...:|.:..::||.| |..:....:..:..|..|....:..:.
Mouse   502 QQLKQRMLEYFQTTWSVNNGIDSNELLKDFPDELRSD-ITMHLNKEILQLSLFECASRGCLRSLS 565

  Fly  1138 TKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFG------EICLLTN 1196
            ..:|.....||:.::::|.....:||:..|.:: |:.:..|...|..|...|      :..:.||
Mouse   566 LHIKTSFCAPGEYLLRQGDALQAIYFVCSGSME-VLKDSMVLAILGKGDLIGANLSIKDQVIKTN 629

  Fly  1197 ARRVASVRAETYCNLFSLSVDHFNCVLDQYP-LMRKTMETVAAERLNKIGKNPNIMHQKD--EQL 1258
                |.|:|.|||:|..:.:.....||..|| ...|.:|.:..:....:.:.    |:.|  .:|
Mouse   630 ----ADVKALTYCDLQCIILKGLFEVLGLYPEYAHKFVEDIQHDLTYNLREG----HESDVISRL 686

  Fly  1259 SN--------PESNTITAVVNALAAEADDCKDDDMDLKENL----LHGSESSIAEPVQT 1305
            ||        |:.|  .::...|.:..:|.::::::.:|..    ::...||::...:|
Mouse   687 SNKSTVSQAEPKGN--GSINKRLPSIVEDEEEEEVEEEETTSLSPIYTRGSSVSHSKKT 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 4/34 (12%)
Ion_trans 771..1054 CDD:278921 78/314 (25%)
Crp 1118..>1241 CDD:223736 29/129 (22%)
CAP_ED 1124..1233 CDD:237999 28/115 (24%)
Kcnh8XP_036016335.1 PAS_9 40..135 CDD:404329
PLN03192 175..>616 CDD:215625 116/505 (23%)
Crp 549..708 CDD:223736 36/169 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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