DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and cng-2

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_001343690.1 Gene:cng-2 / 190732 WormBaseID:WBGene00022295 Length:819 Species:Caenorhabditis elegans


Alignment Length:929 Identity:169/929 - (18%)
Similarity:330/929 - (35%) Gaps:303/929 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 RKAEFNRQLSAPTDYTHHSSSNGSQQEGSSEANEGHEPVGESTITVASAGVSYPHPYSYPYHYAH 562
            |...:.|.|||            ..||.:  ||| |..|   .:.|..|.:|.|.|         
 Worm    24 RSVRYLRALSA------------KNQERT--ANE-HSSV---DVAVTQASLSVPRP--------- 61

  Fly   563 HASSATAPANLKASLQLHSF--GSHHPCP----YPARPTSTSCTN--------------SFNRRH 607
                        ..|:|.|.  |...|.|    .|.||:..:...              :|..||
 Worm    62 ------------GILRLPSSDPGEEDPQPSTSSIPHRPSKWATVREKSPQIIGGHAKEVTFQERH 114

  Fly   608 ----IRRHKGKLGDRLLS---GDSEESVRCSYCSV----------LNVNDNDLRIS---FENTCT 652
                :.:.:....:|..|   |.:|:..:.|:..|          ::..::|.|.|   .:.|.|
 Worm   115 HKLDLNKSRSTSKNRRKSAQNGGAEDPGQKSFSDVVKTAMMLRTWISAMEHDERESEPDRDATTT 179

  Fly   653 DSLVTAFDDEALLICDQGTEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTD 717
            ::.:||.||.::|                         |:.||..::.:.               
 Worm   180 NAEITAADDRSIL-------------------------PSPPIFQQRQTG--------------- 204

  Fly   718 NRLAMKLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDL 782
                   |...|.::.::.|:..  ::.:...|:|.:||...:.:.::.|:..:   :.|..||:
 Worm   205 -------FTQIKDILTDKCRKLY--YFYVTENSTFFYYWTAIISIGILYNMFAM---VIFIFDDV 257

  Fly   783 S----TRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIP 843
            .    .:|:..|...|..||:|.:|..|...:.:.|  :|....|:...:.......|||:...|
 Worm   258 HFGYFNQWLYVNLFFDFCFLLDCLVGSRMTFVSEGN--EVSQTDKMFKNYRQSRRCKLDLLCLAP 320

  Fly   844 LDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQN 908
            .|:...|..:                         |.|:..:||::..||..::.          
 Worm   321 ADFYLFIDTK-------------------------ASLVRAIRLVKAYRLYEFIM---------- 350

  Fly   909 LQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQG 973
            |.::..|                     |.:    ||:|..|.....::.||:.|:.||..:.||
 Worm   351 LTQRRTD---------------------FPH----FMKILFLTSSCAILFHWNACVYFLFSLYQG 390

  Fly   974 ---------------------------------FPSNSWV--------------------SINEL 985
                                             :|.::.|                    ..|.|
 Worm   391 LTEDDPNAFGFSYYKVFDPRFSICDALYDQDCYYPEDTEVLDIRDERPHYMEDMYKFWDKKFNIL 455

  Fly   986 QESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLD 1050
            |...:..:||..::.:...:...|...:|.:|..:. |.:...:.|...:|..:|...:::..:.
 Worm   456 QIGNFSREYSMTIYWSSLTITKCGQQPWPSKSSQNS-LEIFDTLIGVLVFATIIGGVGSVVTQMS 519

  Fly  1051 SSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEH-RYQGKFFDEELIL--------GELSEKL 1106
            .:...:||.:..::.||.||.:...::.|:...|.: ....:.:|||.||        ..::..|
 Worm   520 QNVNDFREMMDGIKFYMKYRGVQSAIQDRVLNCFLYLNSHNQLYDEEEILSLLPPFFQARIAANL 584

  Fly  1107 REDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDI 1171
            .:|.:        :.|..|...|...:.:||..:|.:|:.|.|.:.::.....:|:.:::|::.:
 Worm   585 HQDTL--------SKVSLFYKCDQRLLQEVVMLVKQQVYSPNDYLCRKNEKAKEMFIVKKGLLAV 641

  Fly  1172 VMAN-GEVATSLSDGSYFGEICL------LTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLM 1229
            :..: |....||.:|..|||:.:      :...||..|:|:..|.:::.|..|....:|.:||..
 Worm   642 IDDDTGVELDSLKEGHTFGELSIVQVKGNILGDRRSVSLRSVGYSDVYVLHQDDVTRLLQEYPEE 706

  Fly  1230 R-KTMETVAAERL---------NKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDD 1284
            | :.||.  |.|:         |::|:    |.:.|:.|.:      .|::..|:.      |:.
 Worm   707 RVRLMEN--ARRMLHSRGLLETNELGE----MCETDDGLDD------EAMLEFLSV------DEQ 753

  Fly  1285 MDLKENLLHGSESSIAEPV 1303
            ::..||::...::.:|..:
 Worm   754 LNRLENIIDSIDTDLANMI 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 3/41 (7%)
Ion_trans 771..1054 CDD:278921 54/339 (16%)
Crp 1118..>1241 CDD:223736 32/130 (25%)
CAP_ED 1124..1233 CDD:237999 28/116 (24%)
cng-2NP_001343690.1 Ion_trans 232..>407 CDD:366146 43/239 (18%)
PLN03192 <457..>713 CDD:215625 54/264 (20%)
CAP_ED 594..711 CDD:237999 28/116 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158449
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.