DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and tax-4

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_499033.1 Gene:tax-4 / 176297 WormBaseID:WBGene00006526 Length:733 Species:Caenorhabditis elegans


Alignment Length:615 Identity:143/615 - (23%)
Similarity:272/615 - (44%) Gaps:140/615 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   735 RIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFND------------------- 780
            ||| |...::...|.:...:||...:.:..:.||:.: :|...|||                   
 Worm   104 RIR-KYLANYTQDPSTDNFYYWTCVVTVAYIYNLLFV-IARQVFNDLIGPSSQSLCRFYNGTLNS 166

  Fly   781 ------------------------DLS--------TRWIAFNCLSDTIFLIDIVVNFRTGIMQQD 813
                                    ||.        ..|:.|:.|.|.::|||..:|:|.|.|.|.
 Worm   167 TTQVECTYNMLTNMKEMPTYSQYPDLGWSKYWHFRMLWVFFDLLMDCVYLIDTFLNYRMGYMDQG 231

  Fly   814 NAEQVILDPKLIAKHYLRTW----FFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAG-RAL 873
               .|:.:.:.:.|.|   |    :.:|.||.||||||.              .:.|.:.. |.|
 Worm   232 ---LVVREAEKVTKAY---WQSKQYRIDGISLIPLDYIL--------------GWPIPYINWRGL 276

  Fly   874 RILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFL 938
            .|            |||:||:||..       ::|..:::..|.                     
 Worm   277 PI------------LRLNRLIRYKR-------VRNCLERTETRS--------------------- 301

  Fly   939 NMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWV-------SINELQESYWLEQYSW 996
            :|.:.| |:..::..:::|.||:.||.|.:....|..:::||       |:.:......|.:|.:
 Worm   302 SMPNAF-RVVVVVWYIVIIIHWNACLYFWISEWIGLGTDAWVYGHLNKQSLPDDITDTLLRRYVY 365

  Fly   997 ALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVK 1061
            :.:.:...:..||....|.:::...::| |.::.|...:|..:|:..::|.::.::|.:::.|:.
 Worm   366 SFYWSTLILTTIGEVPSPVRNIEYAFVT-LDLMCGVLIFATIVGNVGSMISNMSAARTEFQNKMD 429

  Fly  1062 QVEEYMAYRKLPRDMRQRITEYFEHRYQGK-FFDEELILGELSEKLREDVINYNCRSLVASVPFF 1125
            .:::||..||:.:.:..|:.::|::.:..| ...::.:|..|.:||:.::........:..|..|
 Worm   430 GIKQYMELRKVSKQLEIRVIKWFDYLWTNKQSLSDQQVLKVLPDKLQAEIAMQVHFETLRKVRIF 494

  Fly  1126 ANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANG-EVATSLSDGSYFG 1189
            .:.::..::::|.||:.:||.|||.|.|:|.||.:||.::.|.:.:|..:| :|..:|.:||.||
 Worm   495 QDCEAGLLAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQVVDDDGKKVFVTLQEGSVFG 559

  Fly  1190 EICLLTNA------RRVASVRAETYCNLFSLS-VDHFNCVLDQYPLMRKTMETVAAERLNK---I 1244
            |:.:|..|      ||.|:||:..|.:||.|| .|.:| .|.:||..||.:.....|.|.|   :
 Worm   560 ELSILNIAGSKNGNRRTANVRSVGYTDLFVLSKTDLWN-ALREYPDARKLLLAKGREILKKDNLL 623

  Fly  1245 GKNPNIMHQKDEQLSNPESNTITAVVNALA 1274
            .:|.....:..|:::...:|.:..:...:|
 Worm   624 DENAPEEQKTVEEIAEHLNNAVKVLQTRMA 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 5/15 (33%)
Ion_trans 771..1054 CDD:278921 68/345 (20%)
Crp 1118..>1241 CDD:223736 47/130 (36%)
CAP_ED 1124..1233 CDD:237999 45/116 (39%)
tax-4NP_499033.1 Ion_trans 197..421 CDD:278921 62/285 (22%)
Crp 487..680 CDD:223736 53/168 (32%)
CAP_ED 493..610 CDD:237999 45/117 (38%)
CLZ 609..675 CDD:293134 7/45 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.