DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and tax-2

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_492427.3 Gene:tax-2 / 172723 WormBaseID:WBGene00006525 Length:800 Species:Caenorhabditis elegans


Alignment Length:842 Identity:180/842 - (21%)
Similarity:313/842 - (37%) Gaps:212/842 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 KYCLTDLTR--RKAEFN----RQLSAPTDYTHHSSSNGSQQEGSSEANEGH----EPVGESTITV 543
            |...|:|.|  ||.||:    ::.|.||..        |::|..|..:|..    :|...|....
 Worm     6 KRAKTNLAREIRKREFSYVDRQKASKPTQL--------SEKEWKSPRSEDSFDLLDPANASKEPS 62

  Fly   544 ASAGVSYPHPYSYPYHYAHHASSATAPANLKASLQLHSFGSHHPCPYPARPTSTSCTNSFNRRHI 608
            ||.. ..|:|.:.|...........:|.     |.|......|.......|.|:...||.:    
 Worm    63 ASTR-PLPYPPTRPPEVVIQIDEVESPI-----LGLIDETDDHELDGRLDPASSFDANSLS---- 117

  Fly   609 RRHKGKLGDRLLSGDSEESVRCSYCSVLNVNDNDLRISFENTCTDSLVTAFDDEALLICDQGTEM 673
                              :.|.|     ::.::|:|........:.|.:...:     ..:.|..
 Worm   118 ------------------ATRAS-----SIIEDDVRSQISFIMRERLHSIAKE-----VHRRTSA 154

  Fly   674 VHFDDVSLYGTPKEEPMPNIPIVSEKVSANFLKSQLQSWF-------QPT----DNRLAMKLFGS 727
            |..|.:      :|.|...:.:.|.....|..:..|.|..       .||    .|.....|.|:
 Worm   155 VREDLI------RETPEDTVSMASNVPKQNEHRPSLMSLIGLQNRSESPTVDTVKNCFGFSLKGT 213

  Fly   728 RKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAIS--FFNDDLSTRWIAFN 790
                              .||...|...|...:.|..:.|...:|:..|  :...|....|...:
 Worm   214 ------------------FHPYGRFYMTWLSLVTLCFLFNAFCIPLRSSYPYQTADNWMYWFIVD 260

  Fly   791 CLSDTIFLIDIV-----VNFRTGIMQQDNAEQVILDPKLIAKHYLRT-WFFLDLISSIPLDYIFL 849
            ...|.:::||::     :.|..|.:|    .::..|.:   :|||.| .|.||::|.:|.|.::.
 Worm   261 YSCDLVYVIDMLLIKPRLRFTRGGIQ----VKIYKDTQ---RHYLMTRTFKLDILSILPTDLMYF 318

  Fly   850 IFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSA 914
            .|.:                               :.:.|::|:::..|.|....:|.|      
 Worm   319 FFGK-------------------------------MPIWRINRVLKINSFWLLFDMLDN------ 346

  Fly   915 DRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPS--- 976
                                 .|.|..::  ||...:..|:.|.|.:.|:.:.:..||.|..   
 Worm   347 ---------------------SFANPYAI--RIARTLSYMIYIIHCNSCVYYKLSALQAFGQIAY 388

  Fly   977 --------NSWVSINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGAT 1033
                    |.||..|  |.:.::..:.:....|.|    .|....|...:..:::| .|.:.|..
 Worm   389 LENGKWYLNKWVYNN--QGNAYIRCFYFTAAVATS----TGNNPAPTNVIEYIYMT-CSWMMGVF 446

  Fly  1034 CYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKFFDEEL 1097
            .:||.||...:::.:.:.:|.:::.|:...........|..:...|:.::|.:.: |.|..||:.
 Worm   447 VFALLLGQIRDIVSNANRNREEFQRKMDLALGECKKLGLKMETTNRVRDWFIYTWQQQKTLDEKK 511

  Fly  1098 ILGELSEKLREDV---INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGT 1159
            ::.:|..||:.|:   ::|   :.::.|..|.:.|...:.|:|.||:..:|.|||:|..:|.:|.
 Worm   512 LIEKLPLKLQTDLALSVHY---TTLSKVQLFQDCDRALLRDLVLKLRPVIFLPGDMICLKGDVGK 573

  Fly  1160 KMYFIQEGVVDIVMA--NGEVATSLSDGSYFGEICLLT---NARRVASVRAETYCNLFSLSVDHF 1219
            :||.|.:|::.:|..  |.::...|:.|:.||||.||.   |.||.||:||:.||.||.|:.:..
 Worm   574 EMYIINQGILQVVGGDHNEKIFAELAQGAVFGEISLLAIGGNNRRTASIRAKGYCTLFVLAKEDL 638

  Fly  1220 NCVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCK 1281
            |.|:..||..:..:...||..|    ||.....:|.|:            :.|.|...|.||
 Worm   639 NDVIRYYPQAQTILRRKAAAML----KNDKKSDEKTEK------------IKAQAELEDRCK 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 9/52 (17%)
Ion_trans 771..1054 CDD:278921 55/301 (18%)
Crp 1118..>1241 CDD:223736 46/127 (36%)
CAP_ED 1124..1233 CDD:237999 43/113 (38%)
tax-2NP_492427.3 Ion_trans 221..467 CDD:366146 58/319 (18%)
CAP_ED 538..652 CDD:237999 43/113 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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