DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Kcnh5

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:NP_598294.1 Gene:Kcnh5 / 171146 RGDID:621417 Length:988 Species:Rattus norvegicus


Alignment Length:761 Identity:171/761 - (22%)
Similarity:294/761 - (38%) Gaps:204/761 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 STSCTNSFNRRHIRRHKGKLGDRLLSGDSEESVRCSYCSVLNVNDNDLRISFENTCTDSLV---- 656
            |::|:..:         |:|.|:    .:.|.||.::       ||     :|:.|.:.|:    
  Rat    62 SSTCSFMY---------GELTDK----KTIEKVRQTF-------DN-----YESNCFEVLLYKKN 101

  Fly   657 --------------TAFDDEALLICDQGTEMVHFDDVSLYGTPKEEPMPNIPIVSEKVSANFL-- 705
                          ...:...|.:|.       |.|::|:..|.|:.       |.|....|.  
  Rat   102 RTPVWFYMQIAPIRNEHEKVVLFLCT-------FKDITLFKQPIEDD-------STKGWTKFARL 152

  Fly   706 -------KSQLQSWFQPTD--------NRLAMKL-FGSRKALVKERIRQKTSGHWVIHPCSSFRF 754
                   :|.||. ..|.:        :|||..| .||......::...||..|.::|.| :|:.
  Rat   153 TRALTNSRSVLQQ-LTPMNKTETVHKHSRLAEVLQLGSDILPQYKQEAPKTPPHIILHYC-AFKT 215

  Fly   755 YWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVI 819
            .||..:|:|.....|::|..:||.....:..|:..:.:.|.|||:|||:||.|..:....  :||
  Rat   216 TWDWVILILTFYTAIMVPYNVSFKTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGG--EVI 278

  Fly   820 LDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSL 884
            .|||||..:||:|||.:||:|.:|.|.|              ::|:.:..|    |..|...|.:
  Rat   279 SDPKLIRMNYLKTWFVIDLLSCLPYDII--------------NAFENVDEG----ISSLFSSLKV 325

  Fly   885 VRLLRLSRLVR----YVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFM 945
            ||||||.|:.|    |:.....|.:|                                       
  Rat   326 VRLLRLGRVARKLDHYLEYGAAVLVL--------------------------------------- 351

  Fly   946 RIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSI----------NELQESYWLEQ------- 993
                |:|:..|:.||..|:              |.||          |.:|...||.|       
  Rat   352 ----LVCVFGLVAHWLACI--------------WYSIGDYEVIDEVTNTIQIDSWLYQLALSIGT 398

  Fly   994 --------------------YSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALF 1038
                                |..:|:..|:.:..||:|...|.:..:...::..|:.|:..||..
  Rat   399 PYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATI 463

  Fly  1039 LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY-QGKFFDEELILGEL 1102
            .|:.|.:.|.:.::..:|.|.:..|.:::...::|:.:.:|:.:|....: ..|..|.|.:|...
  Rat   464 FGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSIC 528

  Fly  1103 SEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEG 1167
            .:.:|.|:..:..|.:....|.|..|....:..:..:.:.....|||:|...|.....:.|:..|
  Rat   529 PKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSG 593

  Fly  1168 VVDIVMANGEVATSLSDGSYFGEICL--LTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMR 1230
            .::::. :.||...|..|..||:|..  .|.|...|:|||.|||:|..:..:....|||.|....
  Rat   594 SLEVIQ-DEEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFA 657

  Fly  1231 KTME---TVAAERLNKI--GKNPNIMHQKDEQLSNPESNTITAVVN 1271
            .:..   |:......:|  .|..::..:::|:|......|::..|:
  Rat   658 NSFSRNLTLTCNLRKRIIFRKISDVKKEEEERLRQKNEVTLSIPVD 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 14/50 (28%)
PLN03192 741..>1214 CDD:215625 125/516 (24%)
Kcnh5NP_598294.1 PAS_9 39..132 CDD:463873 17/101 (17%)
PLN03192 217..>616 CDD:215625 110/476 (23%)
Selectivity filter. /evidence=ECO:0000250 432..437 2/4 (50%)
Crp 551..758 CDD:440428 37/154 (24%)
Calmodulin-binding. /evidence=ECO:0000255 704..715 171/761 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 718..742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 839..897
CAD (involved in subunit assembly). /evidence=ECO:0000250 909..948
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 946..965
Blue background indicates that the domain is not in the aligned region.

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