DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and LOC1279939

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_061513533.1 Gene:LOC1279939 / 1279939 VectorBaseID:AGAMI1_011151 Length:580 Species:Anopheles gambiae


Alignment Length:604 Identity:142/604 - (23%)
Similarity:257/604 - (42%) Gaps:111/604 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   699 KVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIR-QKTSGHWVIHPCSSFRFYWDLCMLL 762
            |:.....|.:|.|...|:..    |...|...::||..| |:....::|||.|..|.|.|:.:.:
Mosquito    32 KILRALQKLRLASDQHPSTE----KHLKSSYQIIKENERLQQCFPAFIIHPFSLLRLYSDVVVFI 92

  Fly   763 LLVANLIILPVAISF--FNDDLSTRWIAFNCLS-DTIFLIDIVVNFRTGIMQQDNAEQVILDPKL 824
            ::..:|::||.|.||  |....:...:.:..|| ..|.:::..:.|.||.:..:..| ::|:|:.
Mosquito    93 VMNLHLMLLPFAFSFLAFETRPTRHLVEYIDLSLCVILVVEFALTFCTGFVVLETNE-IVLNPRK 156

  Fly   825 IAKHYLRTW-FFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLL 888
            |..:.||.: ...||:...|...:..:|:::           |:.||....::       .|..|
Mosquito   157 IFFNRLRPFRLMYDLLLFFPYILLLEVFDEL-----------IVEAGAEASLV-------FVSFL 203

  Fly   889 RLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICM 953
            .|..:.|:                            :|.....::|.:.|:::...|||..:|..
Mosquito   204 YLCNIARF----------------------------RDSNRYFSVIPRSLDISQSKMRIVEVIMN 240

  Fly   954 MLLIGHWSGCLQFLVPMLQGFPSNSWVS-INELQESYWLEQ------------------------ 993
            .|.:.||:.||.:::|:|....|::..| ..||..:..|.|                        
Mosquito   241 TLYVLHWTTCLGYIIPVLLKVDSSARTSDEEELLAAMHLPQPNVSAALERVANPFVRVRLTDLDT 305

  Fly   994 -YSWALFKAMSHMLCIGYGRFPPQSLTD-------MWLTMLSMISGATCYALFLGH--------- 1041
             .::...::|...|.:|......:.:.:       |||.|            |||.         
Mosquito   306 STAYRYLRSMMITLRVGLASSEKKDIEEHYVYHWIMWLVM------------FLGWLWFNYVPVV 358

  Fly  1042 ATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGKFFDEELILGELSEKL 1106
            ......|.:.:..||.:.:..::.::..::|...:.:::...|..|::.::||||:|:|.....|
Mosquito   359 LCRFFDSPEMATDQYDKFMANLKAFVYNKRLSATLERKLRNNFATRFRTRYFDEEMIMGLFPSNL 423

  Fly  1107 REDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDI 1171
            |..:....||.|||||..|.|.....::|:|..|:.||:...|:||..|:.|..|||:..|.|.:
Mosquito   424 RSSIRMETCRHLVASVDLFKNLPYFILTDIVNCLQLEVYLRDDVIIAAGSYGDSMYFLAAGTVAV 488

  Fly  1172 VMANGEVATSLSDGSYFGEICLL-TNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMET 1235
            ...||:....|:||:|||||.|: .|.:|.|:|.|...|.::.||.:.|..|:..:..:...:..
Mosquito   489 YAMNGKELGHLTDGAYFGEISLIRRNQQRTANVVALEACEIYRLSHEDFQNVVKPHAYLLNRIRK 553

  Fly  1236 VAAERLNKIGKNPNIMHQK 1254
            .|.:||..:.:..:.|:.|
Mosquito   554 QAEQRLAMMKRKKDKMYGK 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 12/42 (29%)
PLN03192 741..>1214 CDD:215625 122/519 (24%)
LOC1279939XP_061513533.1 None

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