DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and Cnga1

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_006503772.1 Gene:Cnga1 / 12788 MGIID:88436 Length:699 Species:Mus musculus


Alignment Length:616 Identity:153/616 - (24%)
Similarity:283/616 - (45%) Gaps:113/616 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 KERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVAN--LIILPVAISFFNDDLSTRWIAFNCLSDT 795
            ||:..::.....||.|..:..:.|..|:.|.::.|  :||..........|....|:.|:.:||.
Mouse   152 KEKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDV 216

  Fly   796 IFLIDIVVNFRTGIMQQDNAEQVILD-PKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQD 859
            ::|.|:.|..|||.::|.   .::.| .|||.|:.....|.||::|.||.|.:::.|.     .:
Mouse   217 VYLADMFVRTRTGYLEQG---LLVKDRMKLIEKYKANLQFKLDVLSVIPTDLLYIKFG-----WN 273

  Fly   860 FSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKD 924
            :.:                   :.|.||||:||:..:..:.|                       
Mouse   274 YPE-------------------IRLNRLLRISRMFEFFQRTE----------------------- 296

  Fly   925 KDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWV--SINELQE 987
                |::       |..::| ||.||:..:::|.||:.|:.:.:....||.:::||  .:|:.:.
Mouse   297 ----TRT-------NYPNIF-RISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPDVNDPEF 349

  Fly   988 SYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWL-TMLSMISGATCYALFLGHATNLIQSLDS 1051
            .....:|.::|:  .|.:.....|..||..|...:: .::..:.|...:|..:|:..::|.::::
Mouse   350 GRLARKYVYSLY--WSTLTLTTIGETPPPVLDSEYIFVVVDFLIGVLIFATIVGNIGSMISNMNA 412

  Fly  1052 SRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLREDV-INYN 1114
            :|.:::.:|..:::||.:|.:.:||.:|:.::|::.:.. |..||..:|..|.:|||.:: ||.:
Mouse   413 ARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVH 477

  Fly  1115 CRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVA 1179
            ..:| ..|..||:.::..:.::|.||:.:|:.|||.|.|:|.||.:||.|:||.:.:|..:|...
Mouse   478 LDTL-KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQ 541

  Fly  1180 -TSLSDGSYFGEICLL------TNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVA 1237
             ..||||||||||.:|      ...||.|::::..|.:||.||.|.....|.:||..:..:|...
Mouse   542 FVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKG 606

  Fly  1238 AERLNK----------IGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDDMDLKENLL 1292
            .:.|.|          :|.:|..:.:|..::........|.....||    :.:.....||:.|.
Mouse   607 RQILMKDGLLDINIANMGSDPKDLEEKVTRMEGSVDLLQTRFARILA----EYESMQQKLKQRLT 667

  Fly  1293 H-------------------GSESSIAEPVQ 1304
            .                   |.||.:.|.:|
Mouse   668 KVEKFLKPLIETEFSALEEPGGESELTESLQ 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 5/17 (29%)
Ion_trans 771..1054 CDD:278921 60/286 (21%)
Crp 1118..>1241 CDD:223736 47/129 (36%)
CAP_ED 1124..1233 CDD:237999 44/115 (38%)
Cnga1XP_006503772.1 Ion_trans 172..414 CDD:366146 66/305 (22%)
CAP_ED 486..602 CDD:237999 44/115 (38%)
CLZ 602..671 CDD:374604 12/72 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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