DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and CNGA3

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_011508856.1 Gene:CNGA3 / 1261 HGNCID:2150 Length:749 Species:Homo sapiens


Alignment Length:873 Identity:204/873 - (23%)
Similarity:361/873 - (41%) Gaps:195/873 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 TDYTHHSSSNGSQQEGSSEANEGHEPVGESTITVASAGVSYPHPYSYPYHYAHHASSATAPANLK 574
            |.|:|.|.::...:....:.|.            |..|:|           ..|:||....:.|:
Human     6 TQYSHPSRTHLKVKTSDRDLNR------------AENGLS-----------RAHSSSEETSSVLQ 47

  Fly   575 ASLQLHSFGSHHPCPYPARPTSTSCTNSFNRRHIRRHKGKLGDRLLSGDSEESVRCS-------- 631
            ..:.:.:           |..:.|...||..:.|.|. |::..:   ...|:.||.:        
Human    48 PGIAMET-----------RGLADSGQGSFTGQGIARF-GRIQKK---SQPEKVVRAASRGRPLIG 97

  Fly   632 ---YCSVLNVNDNDLRISFENTCTDSLVTAFDDEALLICDQGTEMVHFDDVSLYGTPKEEPMPNI 693
               :|:....:::::.::....|:............|:.......||..|......|.......:
Human    98 WTQWCAEDGGDESEMALAGSPGCSSGPQGRLSRLIFLLRRWAARHVHHQDQGPDSFPDRFRGAEL 162

  Fly   694 PIVSEKVS---ANFLKSQLQSWFQPTD-NRLA---MKLFGSRKALVKERIRQKTSGHWVIHPCSS 751
            ..||.:.|   || :.||     :|.| .|.|   .|...:.....:|..:.|.....|:.|.|:
Human   163 KEVSSQESNAQAN-VGSQ-----EPADRGRSAWPLAKCNTNTSNNTEEEKKTKKKDAIVVDPSSN 221

  Fly   752 FRFYWDLCMLLLLVANLIILPVAISFFN----------DDLSTR----WIAFNCLSDTIFLIDIV 802
            ..:.|       |.|  |.|||   |:|          |:|.:.    |:..:..:|.::::|::
Human   222 LYYRW-------LTA--IALPV---FYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDVL 274

  Fly   803 VNFRTGIMQQDNAEQVILDPKLIAKHY-LRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQI 866
            |..|||.::|.   .::.|...:.:|| ..|.|.||::|.:|.|..:                  
Human   275 VRARTGFLEQG---LMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAY------------------ 318

  Fly   867 LHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKS 931
            |..|.....:|..      |||:.|||..:..:.|                           |::
Human   319 LKVGTNYPEVRFN------RLLKFSRLFEFFDRTE---------------------------TRT 350

  Fly   932 NLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWV--SINELQESYWLEQY 994
            |    :.||    .||.||:..:|:|.||:.|:.|.:....||.::|||  :|:..:......:|
Human   351 N----YPNM----FRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEHGRLSRKY 407

  Fly   995 SWALFKAMSHMLCIGYGRFPPQSLTDMWL-TMLSMISGATCYALFLGHATNLIQSLDSSRRQYRE 1058
            .::|:  .|.:.....|..||....:.:| .::..:.|...:|..:|:..::|.::::||.:::.
Human   408 IYSLY--WSTLTLTTIGETPPPVKDEEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQA 470

  Fly  1059 KVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLREDV-INYNCRSLVAS 1121
            |:..:::||.:||:.:|:..|:..:|::.:.. |..||:.:|..|.:||:.:: ||.:..:| ..
Human   471 KIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTL-KK 534

  Fly  1122 VPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVA-TSLSDG 1185
            |..|.:.::..:.::|.||:..||.|||.|.|:|.||.:||.|.||.:.:|..:|... ..||||
Human   535 VRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDG 599

  Fly  1186 SYFGEICLL------TNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTME---------- 1234
            ||||||.:|      :..||.|::|:..|.:||.||.|.....|.:||..:|.:|          
Human   600 SYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKD 664

  Fly  1235 TVAAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDDMDLKENLLHGSESSI 1299
            .:..|.|.:.|.:|..:.:|.|||.:......|.....||    :.....|.:|:.|     |.:
Human   665 NLIDEELARAGADPKDLEEKVEQLGSSLDTLQTRFARLLA----EYNATQMKMKQRL-----SQL 720

  Fly  1300 AEPVQTIREGLPRPRSGEFRALFEGNTP 1327
            ...|          :.|..:.|.:|..|
Human   721 ESQV----------KGGGDKPLADGEVP 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 9/45 (20%)
Ion_trans 771..1054 CDD:278921 67/300 (22%)
Crp 1118..>1241 CDD:223736 50/139 (36%)
CAP_ED 1124..1233 CDD:237999 46/115 (40%)
CNGA3XP_011508856.1 Ion_trans 241..465 CDD:278921 61/287 (21%)
Crp 531..>701 CDD:223736 58/170 (34%)
CAP_ED 537..653 CDD:237999 46/115 (40%)
CLZ 653..723 CDD:293134 16/78 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.