DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga2b

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_073805825.1 Gene:cnga2b / 103911065 ZFINID:ZDB-GENE-050307-2 Length:682 Species:Danio rerio


Alignment Length:639 Identity:144/639 - (22%)
Similarity:276/639 - (43%) Gaps:152/639 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   714 QPTDNRLAMKLFGSRKALVKERIRQKTSGHW---VIHPCSSFRFYWDLCMLLLLVANLIILPVAI 775
            ||..|       |:.|.:.|::        |   ::.......:||...:...::.|.::|....
Zfish   126 QPDAN-------GNTKGITKKQ--------WETFIVASSDDTYYYWLFFIAAAVLYNWVLLVARA 175

  Fly   776 SFFNDDLSTR----WIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTW-FF 835
            .|  |.|.:.    |:..:.:.|.::::|..:..|||.::|.   .::.|...:...|:.|: |.
Zfish   176 CF--DQLQSETPIVWLVLDYICDFVYILDSCIRLRTGYLEQG---LLVKDLAKLRDSYIHTFQFK 235

  Fly   836 LDLISSIPLDYIFLI---------FNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLS 891
            ||::|.:|.|..::|         ||                                 ||||.|
Zfish   236 LDVLSILPTDLAYIITGINTPQLRFN---------------------------------RLLRFS 267

  Fly   892 RLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLL 956
            |:..:.::.|                           |::       |..::| ||:||:..:|:
Zfish   268 RMFEFFNRTE---------------------------TRT-------NYPNIF-RIWNLVLYILV 297

  Fly   957 IGHWSGCLQFLVPMLQGFPSNSWV--SINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLT 1019
            |.||:.|:.:.:....||.|:.||  :|:..:|......|.:..:  .|.:.....|..||....
Zfish   298 IIHWNACIFYAISKSLGFGSDEWVYPNISSTEEGALRRSYIYCFY--WSTLTLTTIGEMPPPVRD 360

  Fly  1020 DMWL-TMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEY 1083
            :.:: .:...:.|...:|..:|:..::|.:::::|.:::.::..::.||.:||:.|.:..|:.::
Zfish   361 EEYVFVVFDFLVGVLIFATIVGNVGSMISNMNATRAEFQARIDAIKHYMHFRKVSRHLETRVIKW 425

  Fly  1084 FEHRYQG-KFFDEELILGELSEKLREDV-INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQ 1146
            |::.:.. |..||:.:|..|.:|||.:: ||.:..:| ..|..|.:.::..:.::|.||:.:|:.
Zfish   426 FDYLWTNQKAVDEQEVLKNLPDKLRAEIAINVHLTTL-KKVRIFQDCEAGLLVELVLKLRPQVYS 489

  Fly  1147 PGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATS-LSDGSYFGEICLLT------NARRVASVR 1204
            |||.|.::|.||.:||.|:||.:.:|..:|....: |:.|..||||.:|.      ..||.|::|
Zfish   490 PGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQFALLTAGGCFGEISILNIQGSKMGNRRTANIR 554

  Fly  1205 AETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNK-------IGKNPNIMHQKDEQLSNPE 1262
            :..|.:||.||.|.....:.:||..::.:|....|.|.|       |.:...::...||::...|
Zfish   555 SIGYSDLFCLSKDDLMEAVIEYPDAQRVLEERGREILRKQGLLDEGIAQGGLLVMDTDEKVERLE 619

  Fly  1263 SN-------------TITAVVNAL-----AAEADDC-------KDDDMDLKENL 1291
            .:             ..||....|     |.|...|       .|.:||::.|:
Zfish   620 GSLDILQARFARLLGEFTATQRKLKQRITALERQLCHTGIGLVSDHEMDVESNV 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 7/39 (18%)
PLN03192 741..>1214 CDD:215625 115/501 (23%)
cnga2bXP_073805825.1 None

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