DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cngb3

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_017950391.2 Gene:cngb3 / 100497119 XenbaseID:XB-GENE-6035542 Length:784 Species:Xenopus tropicalis


Alignment Length:610 Identity:141/610 - (23%)
Similarity:263/610 - (43%) Gaps:109/610 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 TP-KEEPMPNIPIVSEKVSANFLKSQLQSWFQPTD-------NRLAMKLFGS--RKALVKERIRQ 738
            || |.:|.|..|...:|......|.:.|:..|..:       :.|..|....  :|:|.|.::..
 Frog   136 TPVKPKPAPPPPPPPKKEEKPEAKDEKQAEKQAEEAEKEHYCDMLCCKFKRPTLKKSLQKFKLPS 200

  Fly   739 KTSGH-------WVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTI 796
            ....:       |:.....||.  |: |.|:.:   ..:.||...  |:.|  .|:..:.:.|.:
 Frog   201 SIDAYTDHSYLLWLFFVAVSFN--WN-CWLIPM---RCVFPVQTP--NNIL--YWMISDYICDAL 255

  Fly   797 FLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFS 861
            :||||.: |:..:......:.:....:..|.::..|.|.||:.|.||.|.::::|          
 Frog   256 YLIDIFI-FQPRLQFVKGGDIITERKQTKANYWESTKFRLDVASVIPFDLLYMVF---------- 309

  Fly   862 DSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKD 926
             .||                    .:.|.:||::|.|.:|....|:.:.:|              
 Frog   310 -GFQ--------------------PVFRANRLLKYTSFFEFNDRLEAVMEK-------------- 339

  Fly   927 GLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESYWL 991
                           :...|:......:|.|.|.:.|:.:.....:|..|..||  .:.:.:.:|
 Frog   340 ---------------AYIYRVIRTTGYLLFILHINACIYYWASSYEGIASTKWV--YDGKGNMYL 387

  Fly   992 EQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQY 1056
            ..|    :.|:..::.|| |...||::.::...:|:..:|...::..:|...::|.:..:.:..|
 Frog   388 RCY----YFAVRTLITIG-GLAEPQTVFEIVFQLLNYFTGVFVFSSLIGQMRDVIGAATAGQSYY 447

  Fly  1057 REKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGK-FFDEELILGELSEKLREDV---INYNCRS 1117
            |..|.:...||:..|:|:.::.|:..::|:.:..: ..||..:|.|:..|::..:   :|:   :
 Frog   448 RASVDKTVSYMSSNKIPKVVQNRVRTWYEYTWDSQGMLDESELLEEMPTKMQLAIAIDVNF---A 509

  Fly  1118 LVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMA--NGEVAT 1180
            :|..|..|...||..:.|::.:||..|:.|||.:.|:|.||.:||.|::|.|.::..  |.:|..
 Frog   510 IVDRVDLFKGCDSQMIQDLLLRLKSIVYLPGDFVCKKGEIGREMYIIKQGAVQVLGGPDNQKVLV 574

  Fly  1181 SLSDGSYFGEICLLT---NARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLN 1242
            :|..|:.||||.||:   ..||.|:|.|..:.|||.|.....|.:|..||..:|.:...|.:.|.
 Frog   575 TLKAGAVFGEISLLSAGGGNRRTANVVAYGFANLFILDKKSLNEILVHYPDSKKLLTKKAKKLLK 639

  Fly  1243 KIGK--NPNIMHQKDEQLSNPESNT 1265
            :.||  .|.::::....|..|:..|
 Frog   640 EKGKPAGPAVVNKGFGHLIPPKPET 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 8/57 (14%)
Ion_trans 771..1054 CDD:278921 52/282 (18%)
Crp 1118..>1241 CDD:223736 46/127 (36%)
CAP_ED 1124..1233 CDD:237999 43/113 (38%)
cngb3XP_017950391.2 PLN03192 207..>589 CDD:215625 103/462 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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