DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga2

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_004916824.1 Gene:cnga2 / 100494874 XenbaseID:XB-GENE-992758 Length:675 Species:Xenopus tropicalis


Alignment Length:611 Identity:163/611 - (26%)
Similarity:278/611 - (45%) Gaps:125/611 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 KERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTR----WIAFNCLS 793
            |::..:|....:|:.|...:.:.|.|.:.|.::.|..:|.|...|  |||.|.    |...:.:.
 Frog   133 KKKNDRKVCELFVVDPSGKWYYRWLLVITLPVLYNWFLLVVRACF--DDLQTSYVALWFTLDYIC 195

  Fly   794 DTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT-WFFLDLISSIPLDYIFLIFNQIMKL 857
            |.|::.|||:.||||.::|.   .::.|||.::.:|:|| .|.||:||.:|.|..:.        
 Frog   196 DVIYIADIVIRFRTGFLEQG---LLVRDPKTLSNNYIRTLQFKLDIISILPTDLGYF-------- 249

  Fly   858 QDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNR 922
                          |:.|.|  ..|...|||...|:.....|.|......|:             
 Frog   250 --------------AVGIHR--PELRFNRLLHFPRMFECFDQTETRTSYPNI------------- 285

  Fly   923 KDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWV--SINEL 985
                                  .|||||:..:|||.||:||:.:......||.::|||  ::.:.
 Frog   286 ----------------------FRIFNLVLYILLIIHWNGCIYYAFSKAIGFGADSWVYPNLTDP 328

  Fly   986 QESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTD--MWLTMLSMISGATCYALFLGHATNLIQS 1048
            :..|...:|.:.|:.:...:..||   ..||.:||  ....:...:.|...:|..:|:..::|.:
 Frog   329 KHGYLAREYVYCLYWSTLTLTTIG---DTPQPMTDTEYLFVIFDFLVGVLIFATIVGNVGSMISN 390

  Fly  1049 LDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLREDV-I 1111
            ::::|.:::.|:..::.||.:|::.:|:..::..:|::.:.. |..||..:|..|.:|||.:: |
 Frog   391 MNATRTEFQSKIDAIKHYMQFRRVSKDLEAKVILWFDYLWTNKKTVDEREVLKNLPDKLRAEIAI 455

  Fly  1112 NYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANG 1176
            |.:..:| ..|..|.|.::..:.::|.||:.:||.|||.|.::|.||.:||.|:||.:.:|..:|
 Frog   456 NVHLDTL-KKVRIFQNCEAGLLVELVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVGEDG 519

  Fly  1177 EVATS-LSDGSYFGEICLLT------NARRVASVRAETYCNLFSLSVDHFNCVLDQYP------- 1227
            ....: |:.||.||||.:|.      ..||.||:|:..|.:||.||.|.....|.:||       
 Frog   520 ITHYAVLTSGSCFGEISILNIEGSKMGNRRTASIRSIGYSDLFCLSKDDLMEALVEYPDAKKILE 584

  Fly  1228 -----------LMRKTMETVAA------ERLNKIGKNPNIMHQKDEQLSNPESN---TITAVVNA 1272
                       |:.:|.|.::.      |||..:..|.:|:|.:..:|....||   |:...|..
 Frog   585 ERGREILIKEGLLDETKEKISVKGKSSEERLELVESNLDILHTRFARLLREYSNAQQTLKQRVTL 649

  Fly  1273 LAAEADDCKDDDMDLKENLLHGSESS 1298
            |            :||...:||.|.|
 Frog   650 L------------ELKLRDIHGGEVS 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 4/17 (24%)
PLN03192 741..>1214 CDD:215625 134/490 (27%)
cnga2XP_004916824.1 Ion_trans 153..395 CDD:459842 76/308 (25%)
CAP_ED 467..583 CDD:237999 43/115 (37%)
CLZ 583..651 CDD:465160 15/79 (19%)

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