DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga2

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_004916824.1 Gene:cnga2 / 100494874 XenbaseID:XB-GENE-992758 Length:675 Species:Xenopus tropicalis


Alignment Length:611 Identity:163/611 - (26%)
Similarity:278/611 - (45%) Gaps:125/611 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 KERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTR----WIAFNCLS 793
            |::..:|....:|:.|...:.:.|.|.:.|.::.|..:|.|...|  |||.|.    |...:.:.
 Frog   133 KKKNDRKVCELFVVDPSGKWYYRWLLVITLPVLYNWFLLVVRACF--DDLQTSYVALWFTLDYIC 195

  Fly   794 DTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT-WFFLDLISSIPLDYIFLIFNQIMKL 857
            |.|::.|||:.||||.::|.   .::.|||.::.:|:|| .|.||:||.:|.|..:.        
 Frog   196 DVIYIADIVIRFRTGFLEQG---LLVRDPKTLSNNYIRTLQFKLDIISILPTDLGYF-------- 249

  Fly   858 QDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNR 922
                          |:.|.|  ..|...|||...|:.....|.|......|:             
 Frog   250 --------------AVGIHR--PELRFNRLLHFPRMFECFDQTETRTSYPNI------------- 285

  Fly   923 KDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWV--SINEL 985
                                  .|||||:..:|||.||:||:.:......||.::|||  ::.:.
 Frog   286 ----------------------FRIFNLVLYILLIIHWNGCIYYAFSKAIGFGADSWVYPNLTDP 328

  Fly   986 QESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTD--MWLTMLSMISGATCYALFLGHATNLIQS 1048
            :..|...:|.:.|:.:...:..||   ..||.:||  ....:...:.|...:|..:|:..::|.:
 Frog   329 KHGYLAREYVYCLYWSTLTLTTIG---DTPQPMTDTEYLFVIFDFLVGVLIFATIVGNVGSMISN 390

  Fly  1049 LDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLREDV-I 1111
            ::::|.:::.|:..::.||.:|::.:|:..::..:|::.:.. |..||..:|..|.:|||.:: |
 Frog   391 MNATRTEFQSKIDAIKHYMQFRRVSKDLEAKVILWFDYLWTNKKTVDEREVLKNLPDKLRAEIAI 455

  Fly  1112 NYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANG 1176
            |.:..:| ..|..|.|.::..:.::|.||:.:||.|||.|.::|.||.:||.|:||.:.:|..:|
 Frog   456 NVHLDTL-KKVRIFQNCEAGLLVELVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVGEDG 519

  Fly  1177 EVATS-LSDGSYFGEICLLT------NARRVASVRAETYCNLFSLSVDHFNCVLDQYP------- 1227
            ....: |:.||.||||.:|.      ..||.||:|:..|.:||.||.|.....|.:||       
 Frog   520 ITHYAVLTSGSCFGEISILNIEGSKMGNRRTASIRSIGYSDLFCLSKDDLMEALVEYPDAKKILE 584

  Fly  1228 -----------LMRKTMETVAA------ERLNKIGKNPNIMHQKDEQLSNPESN---TITAVVNA 1272
                       |:.:|.|.::.      |||..:..|.:|:|.:..:|....||   |:...|..
 Frog   585 ERGREILIKEGLLDETKEKISVKGKSSEERLELVESNLDILHTRFARLLREYSNAQQTLKQRVTL 649

  Fly  1273 LAAEADDCKDDDMDLKENLLHGSESS 1298
            |            :||...:||.|.|
 Frog   650 L------------ELKLRDIHGGEVS 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 4/17 (24%)
Ion_trans 771..1054 CDD:278921 72/291 (25%)
Crp 1118..>1241 CDD:223736 49/153 (32%)
CAP_ED 1124..1233 CDD:237999 44/133 (33%)
cnga2XP_004916824.1 Ion_trans 153..395 CDD:366146 76/308 (25%)
Radical_SAM 428..>481 CDD:388499 14/53 (26%)
CAP_ED 467..583 CDD:237999 43/115 (37%)
CLZ 583..651 CDD:374604 15/79 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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