DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and cnga3

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_031752880.1 Gene:cnga3 / 100494840 XenbaseID:XB-GENE-948568 Length:737 Species:Xenopus tropicalis


Alignment Length:621 Identity:154/621 - (24%)
Similarity:281/621 - (45%) Gaps:119/621 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 KERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTR----WIAFNCLS 793
            |::..:|....:||.|.|:..:.|...:.:.::.|...|.....|  |:|...    |:..:..:
 Frog   190 KKKEEEKKKEIFVIDPSSNLYYRWLSIISVPVLYNWCFLVCRACF--DELQRNSIILWLVLDYTA 252

  Fly   794 DTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT-WFFLDLISSIPLDYIFLIFNQIMKL 857
            |.|::.|.:|.||||.::|.   .::.|.|.:.::|.:| .|.|||:|.:|.|..:|        
 Frog   253 DVIYITDTLVRFRTGFLEQG---LLVKDAKKLKENYSKTRQFKLDLLSLLPTDLTYL-------- 306

  Fly   858 QDFSDSFQILHAGRALRILRLAKL------LSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADR 916
                                  |:      |...||||..|:..:..:.|               
 Frog   307 ----------------------KIGLNYPELRFNRLLRFGRMFEFFDRTE--------------- 334

  Fly   917 RGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVS 981
                        |::       |..::| ||.||:..:|:|.||:.|:.|.:....||.:::||.
 Frog   335 ------------TRT-------NYPNIF-RIGNLVLYILIIIHWNACIYFAISKAIGFGTDTWVY 379

  Fly   982 INELQESY--WLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATN 1044
            .|.....|  ...:|.::|:.:...:..||... ||....:....:...:.|...:|..:|:..:
 Frog   380 PNISHPEYGRLARKYIYSLYWSTLTLTTIGETP-PPVKDIEFLFVVFDFLIGVLIFATIVGNVGS 443

  Fly  1045 LIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQG-KFFDEELILGELSEKLRE 1108
            :|.::::|:.:::.|:..:::||.:||:.:|:..|:.::|::.:.. |..||:.:|..|.:||:.
 Frog   444 MISNMNASKAEFQSKIDSIKQYMQFRKVTKDLEARVIKWFDYLWTNKKTMDEKEVLKSLPDKLKA 508

  Fly  1109 DV-INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIV 1172
            :: ||.:..:| ..|..|.:.::..:.::|.||:.:||.|||.|.::|.||.:||.|:||.:.:|
 Frog   509 EIAINVHLDTL-KKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVV 572

  Fly  1173 MANGEVA-TSLSDGSYFGEICLL------TNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMR 1230
            ..:|... ..||||||||||.:|      :..||.|::|:..|.:||.||.|.....|.:||..:
 Frog   573 ADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAK 637

  Fly  1231 KTMET----------VAAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDDM 1285
            ..:|.          :..|...|.|.:|..:.:|.|::.....:..|.....||    |.....:
 Frog   638 TVLEEKGRQILMKDGLIDEEAAKAGADPKDVEEKVEKMETAMDSLQTRFARLLA----DYNSTQL 698

  Fly  1286 DLKENL---------LHGSESSIAEPVQTIREGLPR 1312
            .||:.:         .:|..:|  |...:..||.|:
 Frog   699 KLKQRVTKLESQVKKCYGDNAS--EGGDSAAEGDPQ 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 5/17 (29%)
Ion_trans 771..1054 CDD:278921 64/295 (22%)
Crp 1118..>1241 CDD:223736 48/139 (35%)
CAP_ED 1124..1233 CDD:237999 44/115 (38%)
cnga3XP_031752880.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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