DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and kcnh8

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_031760363.1 Gene:kcnh8 / 100490406 XenbaseID:XB-GENE-981673 Length:1114 Species:Xenopus tropicalis


Alignment Length:624 Identity:141/624 - (22%)
Similarity:267/624 - (42%) Gaps:136/624 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   718 NRLAM--KLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISF-FN 779
            |:|.:  .:|..:.||.:.:::......::|...|:|:..||..:||......:.:|..:|| .|
 Frog   184 NKLNLNNNVFVDKPALPEYKVQDAKKSKFIILHFSTFKAAWDWLILLATFYVAVTVPYNVSFEDN 248

  Fly   780 DD-LSTRWIAFNCLS-DTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSI 842
            || .|||....:.:| :.:|:.||::||||..:.:..  |||...:.|..||:.|||.:|||:::
 Frog   249 DDPSSTRSTTVSDISVEILFITDIILNFRTTYVSESG--QVIFKSRSICIHYVTTWFVIDLIAAL 311

  Fly   843 PLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQ 907
            |.|.:: .||..:.                 .::.|..||..:|||||.||            ||
 Frog   312 PFDLLY-AFNVTVD-----------------NLVSLVHLLKTIRLLRLLRL------------LQ 346

  Fly   908 NLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQ 972
            .|.:.|               ..|.::|..            |:.|..|:.||..|:.:::..::
 Frog   347 KLDRYS---------------QHSTIVLTL------------LMSMFALLAHWMACIWYVIGKME 384

  Fly   973 GFPSN---SWVSINELQESYWLEQ-----------------------YSWALFKAMSHMLCIGYG 1011
              ..|   ||       :..||.:                       |..:|:..:|.:..:|:|
 Frog   385 --MKNKPLSW-------DIGWLHELGKRLESPFHSNDSQGGPTIRSTYIASLYFTLSSLTSVGFG 440

  Fly  1012 RFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDM 1076
            .....:..:...::..|:.||..:||..|:.|.:||.:.|....|..:.|.:::::....||:.:
 Frog   441 NVSANTDVEKIFSICIMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLKDFIRVHHLPQQL 505

  Fly  1077 RQRITEYFEHRYQ-GKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKL 1140
            :||:.|||:..:. ....|...:|.:..::||.|:..|..:.:: .:..|.:|....:..:...:
 Frog   506 KQRMLEYFQTNWSVNNGIDSHELLKDFPDELRSDITMYLNKEIL-QLSLFESASRGCLRSLSLHI 569

  Fly  1141 KYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFG------EICLLTNARR 1199
            |.....||:.::::|.....:|.:..|.:: |:.:|.|...|..|...|      :..:.||   
 Frog   570 KTSFCAPGEYLLRQGDALQAIYLVCSGSME-VLKDGMVLAILGKGDLIGANLSIKDQVIKTN--- 630

  Fly  1200 VASVRAETYCNLFSLSVDHFNCVLDQYP-------------LMRKTMETVAAERLNKIGKNPNIM 1251
             |.|:|.|||:|..:.:.....|||.||             |.....|...::|::::... :.:
 Frog   631 -ADVKALTYCDLQCIILKGLYEVLDFYPEYAHTFVEHIQQDLTYNLREGHESDRMSRLSCK-STL 693

  Fly  1252 HQKDEQLSNPESNTITAVVNALAAEADDCKDDDMDLKEN 1290
            .|.|.:.:...:|.::::|          :|:|.|.:|:
 Frog   694 SQTDLRGNGSINNRLSSIV----------EDEDEDTEED 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 6/34 (18%)
Ion_trans 771..1054 CDD:278921 75/311 (24%)
Crp 1118..>1241 CDD:223736 30/141 (21%)
CAP_ED 1124..1233 CDD:237999 29/127 (23%)
kcnh8XP_031760363.1 PAS_9 40..135 CDD:404329
PLN03192 200..>617 CDD:215625 110/486 (23%)
PRK11753 580..>658 CDD:236969 22/82 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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