DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and kcnh4

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_002942364.2 Gene:kcnh4 / 100488431 XenbaseID:XB-GENE-1014062 Length:1074 Species:Xenopus tropicalis


Alignment Length:701 Identity:159/701 - (22%)
Similarity:276/701 - (39%) Gaps:186/701 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   682 YGTPKEEPMPNIPIVSEKVSANFLKSQLQS------------WFQPTDNRLAMKLFGSRKALVKE 734
            |...|||...|    ....|::|..|:.||            ....:|.:|...|..::.:|.:.
 Frog   142 YSDKKEEKHKN----RRSGSSHFRSSRRQSRTMMCQMSGQVAGRNKSDLKLNSNLLDNKPSLPEY 202

  Fly   735 RIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSD----T 795
            ::.......:::...|.|:..||..:||......:.:|..:.|...|.|........:||    .
 Frog   203 KVASAEKPRFILLHYSIFKALWDWLILLATFYVAVTVPYNVCFTGHDDSVSAARSTIVSDIAVEM 267

  Fly   796 IFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDF 860
            :|:|||::||||..:  .::.||:.:.:.|..|||.||||:|||:::|.|.:: .||        
 Frog   268 LFIIDIILNFRTTYV--SHSGQVVYETRSICIHYLATWFFVDLIAALPFDLLY-AFN-------- 321

  Fly   861 SDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMNRKDK 925
                        :.:..|..||..:|||||.||::.:.::.:.                      
 Frog   322 ------------VTVTSLVHLLKTIRLLRLLRLLQKLDRYSQY---------------------- 352

  Fly   926 DGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSN---SWVSINELQE 987
                 |.::|..            |:.|..|:.||..|:.:::...: ..||   :|       :
 Frog   353 -----SAMVLTL------------LMSMFALLAHWMACVWYVIGRKE-MESNDPVTW-------D 392

  Fly   988 SYWLEQ----------------------YSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMIS 1030
            ..||.:                      |..:|:..:|.:..:|:|.....:..:...::.:|:.
 Frog   393 IGWLHELGKRLEAPYINNSIGGPSIRSAYIASLYFTLSSLTSVGFGNVCANTDAEKIFSICTMLI 457

  Fly  1031 GATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQ-GKFFD 1094
            ||..:|:..|:.|.:||.:.|.|..|..:||.:::::....||:.::||..|||:..:. ....|
 Frog   458 GALMHAVVFGNVTAIIQRMYSRRSLYHTRVKDLKDFIRVHCLPQQLKQRTLEYFQTTWSVNNGID 522

  Fly  1095 EELILGELSEKLREDV-INYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIG 1158
            ...:|.:..::||.|: ::.|...|..||  |..|....:..:...:|.....||:.::::|...
 Frog   523 ANELLKDFPDELRADIAMHLNKDILQLSV--FETASRGCLRALSLHIKTSFCAPGEYLLRQGDAL 585

  Fly  1159 TKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLLTNARRV----ASVRAETYCNLFSLSVDHF 1219
            ...||:..|.::::..| .|...|..|...|  ..|:|..:|    |.|:|.|||:|..||:...
 Frog   586 QANYFVCSGSLEVLKDN-MVLAILGKGDLIG--ADLSNKDQVIKTNADVKALTYCDLQYLSLRGL 647

  Fly  1220 NCVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDD 1284
            ..||:.||           |..||.  ..:|.|                                
 Frog   648 LEVLELYP-----------EYCNKF--RADIHH-------------------------------- 667

  Fly  1285 MDLKENLLHGSESS-----IAEPVQTIREGLPRPRSG-----EFRALFEGN 1325
             ||..||..|||::     ...|    |...|||.||     :..::.|.|
 Frog   668 -DLTFNLREGSETNGCYRFSRSP----RLSQPRPESGATPEKKLASILEDN 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 6/53 (11%)
PLN03192 741..>1214 CDD:215625 118/507 (23%)
kcnh4XP_002942364.2 PAS_9 40..135 CDD:463873
PLN03192 224..>615 CDD:215625 105/463 (23%)
PRK11753 578..>656 CDD:236969 25/91 (27%)
Blue background indicates that the domain is not in the aligned region.

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