DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ih and hcn2

DIOPT Version :9

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_031761796.1 Gene:hcn2 / 100487897 XenbaseID:XB-GENE-1218175 Length:923 Species:Xenopus tropicalis


Alignment Length:631 Identity:349/631 - (55%)
Similarity:452/631 - (71%) Gaps:52/631 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   698 EKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLL 762
            ::..:.|::.||.:..||..|:.::::|||:||:.:|:.|.|::|.|:|||.|.||||||..|||
 Frog    96 DETRSGFMQRQLSAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLL 160

  Fly   763 LLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAK 827
            .:|.||||:||.|:||.|:.:|.||.||.:|||.||:|:|:||||||:.:||.| :||||:.|.:
 Frog   161 FMVGNLIIIPVGITFFKDETTTPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTE-IILDPQKIKR 224

  Fly   828 HYLRTWFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSR 892
            .||||||.:|.:||||:||||||      ::...|| ::....|||||:|..|:|||:|||||||
 Frog   225 KYLRTWFVVDFVSSIPVDYIFLI------VEKGIDS-EVYKTARALRIVRFTKILSLLRLLRLSR 282

  Fly   893 LVRYVSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNM----ASVFMRIFNLICM 953
            |:||:.||||||: :.|..:||            ||...::..|..:|    ||..|||||||.|
 Frog   283 LIRYIHQWEEVYV-EKLWTRSA------------GLFFKSVCFKIFHMTYDLASAVMRIFNLIAM 334

  Fly   954 MLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSL 1018
            |||:.||.|||||||||||.||:|.|||||::....|.|.||:||||||||||||||||..|:|:
 Frog   335 MLLLCHWDGCLQFLVPMLQDFPTNCWVSINKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESM 399

  Fly  1019 TDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEY 1083
            :|:||||||||.||||||:|:||||.||||||||||||:||.||||:||::.|||.|.|||:.:|
 Frog   400 SDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQRLHDY 464

  Fly  1084 FEHRYQGKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPG 1148
            :|||||||.|||:.|||||:|.|||:::|:|||.||||:|.|||||.:||:.::||||:|||||.
 Frog   465 YEHRYQGKMFDEDSILGELNEPLREEIVNFNCRKLVASMPLFANADPSFVTAMLTKLKFEVFQPT 529

  Fly  1149 DIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFS 1213
            |.||:|||||.||||||.|||. |:..|.....||||||||||||||..||.|||||:|||.|:|
 Frog   530 DYIIREGTIGKKMYFIQHGVVS-VLTKGNKEVKLSDGSYFGEICLLTRGRRTASVRADTYCRLYS 593

  Fly  1214 LSVDHFNCVLDQYPLMRKTMETVAAERLNKIG-KNPNIMHQKDEQL-----SNPESNTITAVVNA 1272
            |||||||.||::||:||:..||||.:||::|| ||..:||:....|     :|.|:..|..:|. 
 Frog   594 LSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNKENEIIQEIVK- 657

  Fly  1273 LAAEADDCKDDDM----DLKENLLHGSESSIAEPVQTIREGLPRPR 1314
                    .|.:|    :|.:.|..|..::...|       .|:|:
 Frog   658 --------YDREMVHQAELNQQLAGGMYATCNPP-------SPQPQ 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 17/41 (41%)
Ion_trans 771..1054 CDD:278921 168/286 (59%)
Crp 1118..>1241 CDD:223736 83/122 (68%)
CAP_ED 1124..1233 CDD:237999 74/108 (69%)
hcn2XP_031761796.1 PLN03192 81..>649 CDD:215625 338/574 (59%)
CAP_ED 505..613 CDD:237999 74/108 (69%)
Atrophin-1 659..>874 CDD:397323 8/37 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 310 1.000 Domainoid score I1313
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 654 1.000 Inparanoid score I776
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000897
OrthoInspector 1 1.000 - - otm49282
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X717
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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