DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ih and hcn1

DIOPT Version :10

Sequence 1:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_068072094.1 Gene:hcn1 / 100334297 ZFINID:ZDB-GENE-110520-1 Length:925 Species:Danio rerio


Alignment Length:669 Identity:325/669 - (48%)
Similarity:440/669 - (65%) Gaps:124/669 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 NSFNRRHIRRHKGKLGDRLLSGDSEESVRCSYCSVLNVNDNDLRISFENTCTDSLVTAFDDEALL 665
            ||...::::.|...:|.:   ||.||:                                      
Zfish    31 NSMGSQNMKDHGNSVGGK---GDREEA-------------------------------------- 54

  Fly   666 ICDQGTEMVHFDDVSL----YGTPKEEPMPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFG 726
                   ||.|||:..    ||                    |::.|..:..||..|:.::::||
Zfish    55 -------MVGFDDIDAASRQYG--------------------FMQRQFGAMMQPGVNKFSLRMFG 92

  Fly   727 SRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNC 791
            |:||:.||:.|.:|:|:|:|||.|.|||||||.||::::.||||:||.|:||::..:|.|:.||.
Zfish    93 SQKAVEKEQERVQTAGYWIIHPYSDFRFYWDLIMLIMMMGNLIIIPVGITFFSEQTTTSWLVFNV 157

  Fly   792 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQIMK 856
            .||||||:|:|:||||||:.::::| :|||||:|..:||::||.:|.:||||:||||||      
Zfish   158 ASDTIFLVDLVMNFRTGIVNEESSE-IILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLI------ 215

  Fly   857 LQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYILQNLQKKSADRRGRMN 921
            ::...|| ::....|||||:|..|:|||:||||||||:||:.||||::.:.              
Zfish   216 VEKGFDS-EVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT-------------- 265

  Fly   922 RKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQ 986
                            .::||..:||||||.||||:.||.||||||||:||.||.:.|||:|.:.
Zfish   266 ----------------YDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNGMV 314

  Fly   987 ESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDS 1051
            ...|.:|||:|||||||||||||||...|.|::|:|:||||||.||||||:|:||||.|||||||
Zfish   315 NDSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDS 379

  Fly  1052 SRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNCR 1116
            |||||:||.||||:||::.|||.||||:|.:|:|||||||.|||:.||.||::.|:|:::|:|||
Zfish   380 SRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIFDEDSILNELNDPLKEEIVNFNCR 444

  Fly  1117 SLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMA-NGEVAT 1180
            .|||::|.|||||.|||:.:::|||:|||||.|.||:|||:|.||||||.||..::.. |.|:  
Zfish   445 KLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYIIREGTVGKKMYFIQHGVASVITKFNKEL-- 507

  Fly  1181 SLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIG 1245
            .|:||||||||||||..||.|||||:|||.||||||||||.||::||:||:..||||.:||::  
Zfish   508 KLTDGSYFGEICLLTKGRRTASVRADTYCRLFSLSVDHFNEVLEEYPMMRRAFETVAIDRLDR-- 570

  Fly  1246 KNPNIMHQKDEQLSNPESN 1264
                |:|:     ..||.|
Zfish   571 ----IVHK-----IKPEDN 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630 17/41 (41%)
PLN03192 741..>1214 CDD:215625 271/473 (57%)
hcn1XP_068072094.1 Ion_trans_N 75..117 CDD:400630 17/41 (41%)
PLN03192 110..>614 CDD:215625 295/522 (57%)
CAP_ED 452..560 CDD:237999 72/109 (66%)
PHA03247 <653..906 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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