DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and RLP15

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_177559.1 Gene:RLP15 / 843759 AraportID:AT1G74190 Length:965 Species:Arabidopsis thaliana


Alignment Length:914 Identity:214/914 - (23%)
Similarity:365/914 - (39%) Gaps:249/914 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NNTLEQLHLLR-------TNLSH---VGLL----GFGILGKAKELVIDGHAFQQLPKDLFAGQEI 172
            :|:|..|.||.       .|||.   .||.    |:..|.|.::|.|...|..:....:|.....
plant    90 DNSLLNLSLLHPFEDVRSLNLSSSRCSGLFDDVEGYKSLRKLRKLEILDLASNKFNNSIFHFLSA 154

  Fly   173 ANSLGIIRVTNGNL-SDLPIETFQPLRKLKTLDLHGNQLE-NLKRNQFKNLRELEVLDISHNQIK 235
            |.||..:.:.:.|: ...|.:..:.|..|:.|||..|:.. ::...:..:||:|:.||:|.|:..
plant   155 ATSLTTLFLRSNNMDGSFPAKELRDLTNLELLDLSRNRFNGSIPIQELSSLRKLKALDLSGNEFS 219

  Fly   236 ---KLEAQHIADL---TKLGWCNVSHNALSELSRGTFARN--------SVLKVLHLSHNQIARLD 286
               :|:.:...||   .:.|.|.:::....:||:.....:        :.|:||.||.|::....
plant   220 GSMELQGKFCTDLLFSIQSGICELNNMQELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTV 284

  Fly   287 ANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFT--------QMNY 343
            .:|...::.|..|.|.||...  |..:|||:|.:..:.:.:...|....|:.:        |::.
plant   285 PSSLGSLQSLEYLSLFDNDFE--GSFSFGSLANLSNLMVLKLCSKSSSLQVLSESSWKPKFQLSV 347

  Fly   344 VEL--------------------LDLAENNI------------TKIE----KNSFKDIYQAIINV 372
            :.|                    :||::|||            ||::    :|:....:| |...
plant   348 IALRSCNMEKVPHFLLHQKDLRHVDLSDNNISGKLPSWLLANNTKLKVLLLQNNLFTSFQ-IPKS 411

  Fly   373 SHNALELIETAAFENCV---NITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQ 434
            :||.|.|..:|...|.:   ||..: ..|.|..|.|:.:|.|            ||.:    .:.
plant   412 AHNLLFLDVSANDFNHLFPENIGWI-FPHLRYLNTSKNNFQE------------NLPS----SLG 459

  Fly   435 NMTGLKVLNASYNSI-TEIPKNCFPKLYELHTIDVSHN--------------NISSIF--NGVF- 481
            ||.|::.::.|.||. ..:|::.....|.:..:.:|||              ||..:|  |.:| 
plant   460 NMNGIQYMDLSRNSFHGNLPRSFVNGCYSMAILKLSHNKLSGEIFPESTNFTNILGLFMDNNLFT 524

  Fly   482 -------QTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLY 539
                   ::|.:|..:|:|:|::..:..|..|.||:|..:.:|.|.|...:..||...:||:.|.
plant   525 GKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLFNKSSLQLLD 589

  Fly   540 LNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVM----NSLIYLDLSHNQLGDTLNGESFTG 600
            |:.|.|                        ||..|..    |.::.| |..|:|..|:..   |.
plant   590 LSANSL------------------------SGVIPPQHDSRNGVVLL-LQDNKLSGTIPD---TL 626

  Fly   601 LLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFEL-NLYGNQVKD 664
            |..|:.|.|:||..|....:.:.:.: :..|.|..||.|       |::|  .:| .|...|:.|
plant   627 LANVEILDLRNNRFSGKIPEFINIQN-ISILLLRGNNFT-------GQIP--HQLCGLSNIQLLD 681

  Fly   665 ISKRAFEGLLQLLTLNLSSN------------GIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKT 717
            :|.....|.:.....|.|..            || :..:|:|.|.    :|...|:|     ||.
plant   682 LSNNRLNGTIPSCLSNTSFGFGKECTSYDYDFGI-SFPSDVFNGF----SLHQDFSS-----NKN 736

  Fly   718 NGV-LDDLLSLETLDLSH-----NRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGT 776
            .|: ...||:|:.|.:.:     .:|.|.||     |:|..|...||.|            .|| 
plant   737 GGIYFKSLLTLDPLSMDYKAATQTKIEFATK-----HRYDAYMGGNLKL------------LFG- 783

  Fly   777 KKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWL------DLS 835
                 :|:|.|:::............|::|::|:|.||.:        :|:::|.:      |||
plant   784 -----MDLSENELSGEIPVEFGGLLELRALNLSHNNLSGV--------IPKSISSMEKMESFDLS 835

  Fly   836 HNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQV------------LLAGNPLH 888
            .|::.....:.|.::.||....:::|:|.       |.:..|.|.            ||.|.|.:
plant   836 FNRLQGRIPSQLTELTSLSVFKVSHNNLS-------GVIPQGRQFNTFDAESYFGNRLLCGQPTN 893

  Fly   889 CGCN 892
            ..||
plant   894 RSCN 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 11/36 (31%)
leucine-rich repeat 150..175 CDD:275380 5/24 (21%)
leucine-rich repeat 176..199 CDD:275380 4/23 (17%)
LRR_8 198..258 CDD:290566 17/66 (26%)
leucine-rich repeat 200..223 CDD:275380 6/23 (26%)
LRR_RI 201..545 CDD:238064 101/430 (23%)
leucine-rich repeat 224..271 CDD:275380 12/60 (20%)
LRR_8 245..306 CDD:290566 17/71 (24%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
LRR_8 296..354 CDD:290566 17/85 (20%)
leucine-rich repeat 296..319 CDD:275380 9/22 (41%)
LRR_8 322..401 CDD:290566 23/125 (18%)
leucine-rich repeat 322..343 CDD:275380 3/28 (11%)
leucine-rich repeat 344..367 CDD:275380 9/58 (16%)
leucine-rich repeat 371..390 CDD:275380 6/21 (29%)
leucine-rich repeat 391..414 CDD:275380 7/22 (32%)
leucine-rich repeat 416..438 CDD:275380 4/21 (19%)
LRR_8 437..495 CDD:290566 18/82 (22%)
leucine-rich repeat 439..462 CDD:275380 4/23 (17%)
leucine-rich repeat 463..486 CDD:275380 9/46 (20%)
LRR_RI 486..738 CDD:238064 67/274 (24%)
LRR_8 486..545 CDD:290566 19/58 (33%)
leucine-rich repeat 487..510 CDD:275380 7/22 (32%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
leucine-rich repeat 535..554 CDD:275380 5/18 (28%)
LRR_8 554..614 CDD:290566 16/63 (25%)
leucine-rich repeat 555..578 CDD:275380 3/26 (12%)
leucine-rich repeat 579..603 CDD:275380 7/23 (30%)
leucine-rich repeat 604..627 CDD:275380 6/22 (27%)
LRR_8 626..710 CDD:290566 22/96 (23%)
leucine-rich repeat 628..649 CDD:275380 6/20 (30%)
leucine-rich repeat 652..672 CDD:275380 5/20 (25%)
LRR_8 698..765 CDD:290566 20/72 (28%)
leucine-rich repeat 700..726 CDD:275380 7/26 (27%)
leucine-rich repeat 727..745 CDD:275380 6/22 (27%)
LRR_8 777..839 CDD:290566 15/67 (22%)
leucine-rich repeat 779..802 CDD:275380 3/22 (14%)
leucine-rich repeat 829..852 CDD:275380 6/28 (21%)
RLP15NP_177559.1 LRRNT_2 28..72 CDD:369783
PLN00113 <105..>287 CDD:215061 43/181 (24%)
leucine-rich repeat 106..133 CDD:275380 8/26 (31%)
leucine-rich repeat 134..157 CDD:275380 5/22 (23%)
leucine-rich repeat 158..182 CDD:275380 4/23 (17%)
leucine-rich repeat 183..207 CDD:275380 6/23 (26%)
leucine-rich repeat 208..245 CDD:275380 10/36 (28%)
leucine-rich repeat 246..269 CDD:275380 2/22 (9%)
PLN00113 249..>892 CDD:215061 171/748 (23%)
leucine-rich repeat 270..293 CDD:275380 7/22 (32%)
leucine-rich repeat 294..318 CDD:275380 10/25 (40%)
leucine-rich repeat 319..357 CDD:275380 4/37 (11%)
leucine-rich repeat 368..392 CDD:275380 5/23 (22%)
leucine-rich repeat 440..463 CDD:275380 9/38 (24%)
leucine-rich repeat 465..488 CDD:275380 4/22 (18%)
leucine-rich repeat 489..512 CDD:275380 3/22 (14%)
leucine-rich repeat 513..536 CDD:275380 5/22 (23%)
leucine-rich repeat 537..560 CDD:275380 7/22 (32%)
leucine-rich repeat 561..584 CDD:275380 6/22 (27%)
leucine-rich repeat 585..607 CDD:275380 8/45 (18%)
leucine-rich repeat 608..629 CDD:275380 7/24 (29%)
leucine-rich repeat 630..652 CDD:275380 6/21 (29%)
leucine-rich repeat 653..676 CDD:275380 9/31 (29%)
leucine-rich repeat 677..697 CDD:275380 4/19 (21%)
leucine-rich repeat 744..804 CDD:275380 19/82 (23%)
leucine-rich repeat 749..780 CDD:275380 10/35 (29%)
leucine-rich repeat 805..828 CDD:275380 8/30 (27%)
leucine-rich repeat 829..850 CDD:275380 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.