DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment conv and AT1G17230

DIOPT Version :9

Sequence 1:	NP_001286416.1	Gene:	conv / 36588	FlyBaseID:	FBgn0261269	Length:	1092	Species:	Drosophila melanogaster
Sequence 2:	NP_001322898.1	Gene:	AT1G17230 / 838294	AraportID:	AT1G17230	Length:	1133	Species:	Arabidopsis thaliana

Alignment Length:	984	Identity:	232/984 - (23%)
Similarity:	362/984 - (36%)	Gaps:	290/984 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   197 LRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSEL 261
            ||.:.::||:|..|..........|..|..|::|.|.|.....|.::                 |
plant    66 LRTVTSVDLNGMNLSGTLSPLICKLHGLRKLNVSTNFISGPIPQDLS-----------------L 113

  Fly   262 SRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIAR-IGTIDL 325
            .|.       |:||.|..|:...:.......:..|::|:|.:|.|       ||||.| ||
plant   114 CRS-------LEVLDLCTNRFHGVIPIQLTMIITLKKLYLCENYL-------FGSIPRQIG---- 160

  Fly   326 ARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQ-AIINVSHNALELIETAAFENCV 389
                          .::.::.|.:..||:|.:...|...:.| .||....|....:..:....|.
plant   161 --------------NLSSLQELVIYSNNLTGVIPPSMAKLRQLRIIRAGRNGFSGVIPSEISGCE 211

  Fly   390 NITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIP--IQNMTGLKVLNASYNSIT-- 450
            ::.||.|:.|.|.....:..::....|...|..|.|:  .:||  :.|::.|:||....|..|
plant   212 SLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNRLS--GEIPPSVGNISRLEVLALHENYFTGS 274

  Fly   451 -----------------------EIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDL 492
                                   |||:. ...|.:...||.|.|.::......|..:.:|:.:.|
plant   275 IPREIGKLTKMKRLYLYTNQLTGEIPRE-IGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHL 338

  Fly   493 SHNSM-----REIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLE----KL 548
            ..|.:     ||:     |.|..|.::|||.|.|...:...|..|..|..|.|.:||||    .|
plant   339 FENILLGPIPREL-----GELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPL 398

  Fly   549 FQLPISLNELYFSHNRLTNIPSGTWPV----MNSLIYLDLSHNQLGDT---------------LN 594
            .....:.:.|..|.|.|    ||..|.    ..:||.|.|..|:|...               |.
plant   399 IGFYSNFSVLDMSANSL----SGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLG 459

  Fly   595 GESFTGLLVVQRLKLQN--------NGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPV 651
            ....||.|.::...|||        |.:|......:..:..|:.|.|.|||.|       |::|.
plant   460 DNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFT-------GEIPP 517

  Fly   652 LFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPS---LRNLDLSFNSLTKL 713
              |:   ||            |.:::..|:|||   .|...|...|.|   ::.||||
plant   518 --EI---GN------------LTKIVGFNISSN---QLTGHIPKELGSCVTIQRLDLS------- 555

  Fly   714 DNKTNGV----LDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITF 774
            .||.:|.    |..|:.||.|.||.||::          ..||::..:|.
plant   556 GNKFSGYIAQELGQLVYLEILRLSDNRLT----------GEIPHSFGDLT--------------- 595

  Fly   775 GTKKLVRLDVSHNQINDLRRGVISNFTSLQ-SLDMSYNELSNLKSEEHIFDLPQNLSWLD---LS 835
               :|:.|.:..|.:::.....:...|||| ||::|:|.||..     |.|...||..|:   |:
plant   596 ---RLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGT-----IPDSLGNLQMLEILYLN 652

  Fly   836 HNKIY-HLPFANLVKVKSLKYVDLTNNSL-EDVPASIVGSMRNGSQVLLAGNPLHCGCNAR---- 894
            .||:. .:| |::..:.||...:::||:| ..||.:.|....:.|.  .|||  |..||::
plant   653 DNKLSGEIP-ASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSN--FAGN--HGLCNSQRSHC 712

  Fly   895 ----PLKYFMLQQTIAG---EDLKSIYC---GTPALI-----------KDKQLISLDDEYLHCAE 938
                |.....|...|.|   :.:.:|.|   |:..||           ::...::|:|:   ...
plant   713 QPLVPHSDSKLNWLINGSQRQKILTITCIVIGSVFLITFLGLCWTIKRREPAFVALEDQ---TKP 774

  Fly   939 DEQEMY----KGIDYEQLTDV--RFRE-------------------------VKTNKAGMLTLCW 972
            |..:.|    ||..|:.|.|.  .|.|                         .|.|..|
plant   775 DVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRG------ 833

  Fly   973 YVSGFSDVSDFHVYIRSSSNDVLHQS-----DYAYNNRTAQIPVEELS--TLGEEKLRGAEICIV 1030
              .|.|..:.|...| |:...:.|::     .:.|:..:..:..|.:|  :|||:..||.:.|::
plant   834 --EGASSDNSFRAEI-STLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLL 895

  Fly  1031 SRDSDGNTR 1039
                |.|.|
plant   896 ----DWNAR 900

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
conv	NP_001286416.1	leucine-rich repeat	125..148	CDD:275380
		leucine-rich repeat	150..175	CDD:275380
		leucine-rich repeat	176..199	CDD:275380	1/1 (100%)
		LRR_8	198..258	CDD:290566	12/59 (20%)
		leucine-rich repeat	200..223	CDD:275380	5/22 (23%)
		LRR_RI	201..545	CDD:238064	85/377 (23%)
		leucine-rich repeat	224..271	CDD:275380	8/46 (17%)
		LRR_8	245..306	CDD:290566	11/60 (18%)
		leucine-rich repeat	272..295	CDD:275380	5/22 (23%)
		LRR_8	296..354	CDD:290566	14/58 (24%)
		leucine-rich repeat	296..319	CDD:275380	9/22 (41%)
		LRR_8	322..401	CDD:290566	14/79 (18%)
		leucine-rich repeat	322..343	CDD:275380	0/20 (0%)
		leucine-rich repeat	344..367	CDD:275380	5/22 (23%)
		leucine-rich repeat	371..390	CDD:275380	2/18 (11%)
		leucine-rich repeat	391..414	CDD:275380	5/22 (23%)
		leucine-rich repeat	416..438	CDD:275380	7/23 (30%)
		LRR_8	437..495	CDD:290566	16/82 (20%)
		leucine-rich repeat	439..462	CDD:275380	9/47 (19%)
		leucine-rich repeat	463..486	CDD:275380	5/22 (23%)
		LRR_RI	486..738	CDD:238064	82/294 (28%)
		LRR_8	486..545	CDD:290566	19/63 (30%)
		leucine-rich repeat	487..510	CDD:275380	7/27 (26%)
		leucine-rich repeat	511..534	CDD:275380	8/22 (36%)
		leucine-rich repeat	535..554	CDD:275380	8/22 (36%)
		LRR_8	554..614	CDD:290566	21/86 (24%)
		leucine-rich repeat	555..578	CDD:275380	7/26 (27%)
		leucine-rich repeat	579..603	CDD:275380	9/38 (24%)
		leucine-rich repeat	604..627	CDD:275380	5/30 (17%)
		LRR_8	626..710	CDD:290566	25/86 (29%)
		leucine-rich repeat	628..649	CDD:275380	8/20 (40%)
		leucine-rich repeat	652..672	CDD:275380	3/19 (16%)
		LRR_8	698..765	CDD:290566	20/73 (27%)
		leucine-rich repeat	700..726	CDD:275380	9/29 (31%)
		leucine-rich repeat	727..745	CDD:275380	7/17 (41%)
		LRR_8	777..839	CDD:290566	20/65 (31%)
		leucine-rich repeat	779..802	CDD:275380	3/22 (14%)
		leucine-rich repeat	829..852	CDD:275380	7/26 (27%)
AT1G17230	NP_001322898.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000