DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and AT3G28040

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_189443.2 Gene:AT3G28040 / 822428 AraportID:AT3G28040 Length:1016 Species:Arabidopsis thaliana


Alignment Length:587 Identity:165/587 - (28%)
Similarity:250/587 - (42%) Gaps:133/587 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 QPLRKLKTLDLHGNQLE-NLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNAL 258
            |.|::||.|.|..|... |:  |...|...|:.||:|||.:.......:..:|.|...:::.|:.
plant    98 QKLQRLKVLSLSNNNFTGNI--NALSNNNHLQKLDLSHNNLSGQIPSSLGSITSLQHLDLTGNSF 160

  Fly   259 S-ELSRGTFARNSVLKVLHLSHNQI-ARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGS----I 317
            | .||...|...|.|:.|.||||.: .::.:..|| ...|..|.||.|..:  |..:|.|    :
plant   161 SGTLSDDLFNNCSSLRYLSLSHNHLEGQIPSTLFR-CSVLNSLNLSRNRFS--GNPSFVSGIWRL 222

  Fly   318 ARIGTIDLARNRLK-KIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSHNALELIE 381
            .|:..:||:.|.|. .|...:.:..|..||         ::::|.|.....:.|.:         
plant   223 ERLRALDLSSNSLSGSIPLGILSLHNLKEL---------QLQRNQFSGALPSDIGL--------- 269

  Fly   382 TAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIP--IQNMTGLKVLNA 444
                  |.::..:|||.|..:....|:..:.....:|.:| |||.: ...|  |.:||||..|:.
plant   270 ------CPHLNRVDLSSNHFSGELPRTLQKLKSLNHFDVS-NNLLS-GDFPPWIGDMTGLVHLDF 326

  Fly   445 SYNSIT-EIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTL 508
            |.|.:| ::|                    |||.|     |.||:.::||.|.:.       |.:
plant   327 SSNELTGKLP--------------------SSISN-----LRSLKDLNLSENKLS-------GEV 359

  Fly   509 PTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLT-NIPSGT 572
            |..||   |..||:         :..|:....:.|..:..|.|  .|.|:.||.|.|| :||.|:
plant   360 PESLE---SCKELM---------IVQLKGNDFSGNIPDGFFDL--GLQEMDFSGNGLTGSIPRGS 410

  Fly   573 WPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQR-LKLQNNGISQ--PPKDAVAVMSTLQYLHLE 634
            ..:..|||.||||||.|..::.||  .||.:..| |.|..|..:.  ||:        :::  |:
plant   411 SRLFESLIRLDLSHNSLTGSIPGE--VGLFIHMRYLNLSWNHFNTRVPPE--------IEF--LQ 463

  Fly   635 NNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGL-- 697
            |..:..|..||           |.|:...||.:   ...||:|.|:.:|     |...|..|:  
plant   464 NLTVLDLRNSA-----------LIGSVPADICE---SQSLQILQLDGNS-----LTGSIPEGIGN 509

  Fly   698 -PSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLS 761
             .||:.|.||.|:||....|:   |.:|..|:.|.|..|::|....|.....|    ||..:|:|
plant   510 CSSLKLLSLSHNNLTGPIPKS---LSNLQELKILKLEANKLSGEIPKELGDLQ----NLLLVNVS 567

  Fly   762 YN 763
            :|
plant   568 FN 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380 2/3 (67%)
LRR_8 198..258 CDD:290566 17/60 (28%)
leucine-rich repeat 200..223 CDD:275380 8/23 (35%)
LRR_RI 201..545 CDD:238064 90/354 (25%)
leucine-rich repeat 224..271 CDD:275380 13/47 (28%)
LRR_8 245..306 CDD:290566 21/62 (34%)
leucine-rich repeat 272..295 CDD:275380 8/23 (35%)
LRR_8 296..354 CDD:290566 17/62 (27%)
leucine-rich repeat 296..319 CDD:275380 8/26 (31%)
LRR_8 322..401 CDD:290566 16/79 (20%)
leucine-rich repeat 322..343 CDD:275380 5/21 (24%)
leucine-rich repeat 344..367 CDD:275380 4/22 (18%)
leucine-rich repeat 371..390 CDD:275380 1/18 (6%)
leucine-rich repeat 391..414 CDD:275380 5/22 (23%)
leucine-rich repeat 416..438 CDD:275380 8/23 (35%)
LRR_8 437..495 CDD:290566 17/58 (29%)
leucine-rich repeat 439..462 CDD:275380 6/23 (26%)
leucine-rich repeat 463..486 CDD:275380 5/22 (23%)
LRR_RI 486..738 CDD:238064 78/258 (30%)
LRR_8 486..545 CDD:290566 14/58 (24%)
leucine-rich repeat 487..510 CDD:275380 5/22 (23%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..554 CDD:275380 4/18 (22%)
LRR_8 554..614 CDD:290566 28/61 (46%)
leucine-rich repeat 555..578 CDD:275380 10/23 (43%)
leucine-rich repeat 579..603 CDD:275380 13/23 (57%)
leucine-rich repeat 604..627 CDD:275380 6/25 (24%)
LRR_8 626..710 CDD:290566 23/86 (27%)
leucine-rich repeat 628..649 CDD:275380 5/20 (25%)
leucine-rich repeat 652..672 CDD:275380 4/19 (21%)
LRR_8 698..765 CDD:290566 23/66 (35%)
leucine-rich repeat 700..726 CDD:275380 10/25 (40%)
leucine-rich repeat 727..745 CDD:275380 6/17 (35%)
LRR_8 777..839 CDD:290566
leucine-rich repeat 779..802 CDD:275380
leucine-rich repeat 829..852 CDD:275380
AT3G28040NP_189443.2 LRRNT_2 33..73 CDD:285463
PLN00113 40..1002 CDD:215061 165/587 (28%)
leucine-rich repeat 79..102 CDD:275380 2/3 (67%)
LRR_RI 81..380 CDD:238064 92/356 (26%)
leucine-rich repeat 103..125 CDD:275380 8/23 (35%)
leucine-rich repeat 126..149 CDD:275380 6/22 (27%)
leucine-rich repeat 150..174 CDD:275380 6/23 (26%)
leucine-rich repeat 175..198 CDD:275380 8/23 (35%)
leucine-rich repeat 199..224 CDD:275380 8/26 (31%)
leucine-rich repeat 225..248 CDD:275380 5/22 (23%)
leucine-rich repeat 249..272 CDD:275380 6/46 (13%)
leucine-rich repeat 273..296 CDD:275380 5/22 (23%)
leucine-rich repeat 297..320 CDD:275380 8/24 (33%)
leucine-rich repeat 321..344 CDD:275380 11/47 (23%)
leucine-rich repeat 345..366 CDD:275380 8/30 (27%)
leucine-rich repeat 369..390 CDD:275380 4/29 (14%)
leucine-rich repeat 392..416 CDD:275380 10/23 (43%)
leucine-rich repeat 417..440 CDD:275380 13/24 (54%)
leucine-rich repeat 441..464 CDD:275380 7/32 (22%)
leucine-rich repeat 465..488 CDD:275380 7/36 (19%)
leucine-rich repeat 489..534 CDD:275380 18/52 (35%)
leucine-rich repeat 537..560 CDD:275380 7/26 (27%)
leucine-rich repeat 561..584 CDD:275380 4/9 (44%)
STKc_IRAK 732..1002 CDD:270968
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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