DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and TLR3

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_003256.1 Gene:TLR3 / 7098 HGNCID:11849 Length:904 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
LRR_8 198..258 CDD:290566
leucine-rich repeat 200..223 CDD:275380
LRR_RI 201..545 CDD:238064
leucine-rich repeat 224..271 CDD:275380
LRR_8 245..306 CDD:290566
leucine-rich repeat 272..295 CDD:275380
LRR_8 296..354 CDD:290566
leucine-rich repeat 296..319 CDD:275380
LRR_8 322..401 CDD:290566
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 416..438 CDD:275380
LRR_8 437..495 CDD:290566
leucine-rich repeat 439..462 CDD:275380
leucine-rich repeat 463..486 CDD:275380
LRR_RI 486..738 CDD:238064
LRR_8 486..545 CDD:290566
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..554 CDD:275380
LRR_8 554..614 CDD:290566
leucine-rich repeat 555..578 CDD:275380
leucine-rich repeat 579..603 CDD:275380
leucine-rich repeat 604..627 CDD:275380
LRR_8 626..710 CDD:290566
leucine-rich repeat 628..649 CDD:275380
leucine-rich repeat 652..672 CDD:275380
LRR_8 698..765 CDD:290566
leucine-rich repeat 700..726 CDD:275380
leucine-rich repeat 727..745 CDD:275380
LRR_8 777..839 CDD:290566
leucine-rich repeat 779..802 CDD:275380
leucine-rich repeat 829..852 CDD:275380
TLR3NP_003256.1 LRRNT 28..50 CDD:396168
leucine-rich repeat 33..52 CDD:275380
LRR 1 52..73
leucine-rich repeat 53..76 CDD:275380
PLN00113 72..>542 CDD:215061
LRR 2 76..97
leucine-rich repeat 77..100 CDD:275380
LRR 3 100..121
leucine-rich repeat 101..124 CDD:275380
LRR 4 124..145
leucine-rich repeat 125..148 CDD:275380
LRR 5 148..168
leucine-rich repeat 149..198 CDD:275380
LRR 6 172..193
LRR 7 198..219
leucine-rich repeat 199..249 CDD:275380
LRR 8 222..244
LRR 9 249..270
leucine-rich repeat 250..275 CDD:275380
LRR 10 275..296
leucine-rich repeat 276..299 CDD:275380
LRR 11 299..320
leucine-rich repeat 300..321 CDD:275380
LRR 12 323..344
LRR 13 356..377
leucine-rich repeat 357..380 CDD:275380
LRR 14 380..400
leucine-rich repeat 381..406 CDD:275380
LRR 15 408..429
leucine-rich repeat 409..432 CDD:275380
LRR 16 432..454
leucine-rich repeat 433..457 CDD:275380
leucine-rich repeat 458..481 CDD:275380
LRR 17 465..486
leucine-rich repeat 482..507 CDD:275380
LRR 18 507..528
leucine-rich repeat 508..531 CDD:275380
LRR 19 531..552
leucine-rich repeat 532..563 CDD:275380
LRR_8 562..622 CDD:404697
LRR 20 563..584
leucine-rich repeat 564..585 CDD:275380
LRR 21 587..608
leucine-rich repeat 588..611 CDD:275380
LRR 22 611..632
leucine-rich repeat 612..630 CDD:275380
leucine-rich repeat 637..659 CDD:275380
LRRCT 645..697 CDD:214507
Tlr3_TMD 698..730 CDD:407816
TIR 755..900 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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