DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and Tlr8

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_001094479.1 Gene:Tlr8 / 684440 RGDID:1590327 Length:1029 Species:Rattus norvegicus


Alignment Length:999 Identity:237/999 - (23%)
Similarity:386/999 - (38%) Gaps:274/999 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 EIANSLGIIRVTNGNLSDLPI-----ETFQPLRKLKTLDLHGNQLE----------NLKRNQFKN 220
            |:..::|.. ||:.:|||..|     |:||..|.|..::|:.|..:          |:....|.:
  Rat    53 EVPQTIGKY-VTDVDLSDNTIMHITNESFQKFRNLTKINLNHNAKQQHPNENKNGMNITEGAFLS 116

  Fly   221 LRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARL 285
            ||.|..|.:..||:..:.|                 .|.|          .||.|.|..|.|.::
  Rat   117 LRNLTELLLEDNQLYTIPA-----------------GLPE----------SLKELSLIQNNIFQV 154

  Fly   286 DANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLA 350
            ..|:..|:|.|.||:|..|..                  ...|::.|:|...|..:..::||.|:
  Rat   155 TKNNTFGLRNLERLYLGWNCY------------------FKCNQIFKVEDGAFNNLINLKLLSLS 201

  Fly   351 ENNITKIE---KNSFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDET 412
            .||:..:.   .:|...::     :|:..:..|....|:...::.:||||.|     ..|.|:..
  Rat   202 FNNLFSVPPKLPSSLSKLF-----LSNAKISTITQEDFKGLEHLILLDLSGN-----CPRCFNAP 256

  Fly   413 TFATYFQLSYNNLT---NLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNN-I 473
                 |.....||:   .:..:..||:|.|:.||.|..|:..||...|..|..|..:.:..|. :
  Rat   257 -----FPCESCNLSASIRIHPLAFQNLTQLRFLNLSSTSLRTIPSTWFDNLTNLKELHLEFNYLV 316

  Fly   474 SSIFNGVFQT-LFSLRSIDLSHNSMRE------IKSSTFGTLPTLLEMDLS---HNELVSVVRGS 528
            ..|.:|.|.| |.||:::|||.|.:.:      ..|..|..|.:|.::.|.   ..||.......
  Rat   317 QEIASGAFLTKLPSLQTLDLSFNFIHKEYLQYITISPNFSMLRSLRKLHLKGYVFRELKKEHFKP 381

  Fly   529 LAKLTSLRQLYLNNNQLEKL----FQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQL 589
            |..|.:|..:.|..|.:||:    ||...:|..:|.|.||:.::..||            .|:. 
  Rat   382 LQNLPNLTTINLGINFIEKIDFKAFQDFPNLKVIYLSGNRIASVIDGT------------DHSS- 433

  Fly   590 GDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMST--------LQYLHLENNNITTLERSAF 646
                                ..|.:.:|       :||        :.:.| ....:...:.:.:
  Rat   434 --------------------WRNRLRKP-------LSTDYDEFDPHMNFYH-STEPLIKPQCTTY 470

  Fly   647 GKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLS--SNGIQTLQNDIFVGLPSLRNLDLSFNS 709
            ||     .|:|..|.:..|.|..|||...:..||||  :|| |.|....|..:|.::.|||:.|.
  Rat   471 GK-----ALDLSLNNIFVIGKSQFEGFQDIACLNLSFNANG-QVLNGTEFSSMPHIKYLDLTNNR 529

  Fly   710 LTKLDNKTNGVLDDLLSLETLDLSHN-----------RISFVTKKTFPSHQYIPYNLRNLNLSYN 763
            |...||:|   ..||..||.||||||           |:.|:...         ..|:.||||:|
  Rat   530 LDFDDNQT---FSDLHDLEVLDLSHNAHYFSIAGVTHRLGFIQNL---------IKLKVLNLSHN 582

  Fly   764 LMPILTYDITFGTKKLVRLDVSHNQINDLRRG----VISNFTSLQS---LDMSYNELSNLKSEEH 821
            .:..||.:....:|.|..|..|.|:::.|...    ..|.||||::   ||:|||.|..:.:|..
  Rat   583 GIYTLTDEYKLQSKSLKELVFSGNRLDRLWNANDGKYWSIFTSLETLTRLDLSYNNLQQIPNEAF 647

  Fly   822 IFDLPQNL-------------SW-----------LDLSHNKIY---------------------- 840
            : :|||:|             :|           |||..|::|                      
  Rat   648 L-NLPQSLQELHINDNRLRFFNWTLLQYFPHLHVLDLGRNELYFLTNCLSKFTHSLKTLLLNHNH 711

  Fly   841 --HLPFANLVKVKSLKYVDLTNNSLEDV-PASIVGSMRNGSQVL-LAGNPLHCGCNARPLKYFML 901
              |||...|.:.::|.|:||:.|:::.: .:|:....:....|| |.||...|.|:....:.::.
  Rat   712 FSHLPAGFLSEARNLVYLDLSFNTIKMINKSSLQTETKTNLSVLDLQGNHFDCTCDISDFRSWLE 776

  Fly   902 QQT-IAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQLTDVRFREVKTNKA 965
            :.. :....|..:.|..|...:.|.::|||  ...|..|........         |..:.|:..
  Rat   777 ENPHVRIPRLVDVICSNPGDQRWKSVMSLD--LTTCVSDTTAAILFF---------FTFLTTSTV 830

  Fly   966 GMLTL--------CWYVSGFSDVSDFHV-------YIRSSSNDVLHQSDYAYNNRTAQIP---VE 1012
            .:..|        .|::        :|:       |..||::...:.:..:|:.:.|.:.   :.
  Rat   831 LLAALVHHLFYWDVWFI--------YHMCSAKLRGYRSSSTSQTFYDAYISYDTKDASVTDWVIN 887

  Fly  1013 ELS-TLGEEKLRGAEICIVSRDSD 1035
            ||. .|.|.:.:...:|:..||.|
  Rat   888 ELRYHLEESEDKSVLLCLEERDWD 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380 1/3 (33%)
leucine-rich repeat 176..199 CDD:275380 10/27 (37%)
PPP1R42 191..359 CDD:455733 42/185 (23%)
LRR_8 198..258 CDD:404697 13/69 (19%)
leucine-rich repeat 200..223 CDD:275380 6/32 (19%)
leucine-rich repeat 224..271 CDD:275380 7/46 (15%)
leucine-rich repeat 272..295 CDD:275380 8/22 (36%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
leucine-rich repeat 322..343 CDD:275380 4/20 (20%)
leucine-rich repeat 344..367 CDD:275380 6/25 (24%)
LRR 346..718 CDD:443914 100/402 (25%)
leucine-rich repeat 371..390 CDD:275380 3/18 (17%)
leucine-rich repeat 391..414 CDD:275380 7/22 (32%)
leucine-rich repeat 416..438 CDD:275380 5/24 (21%)
leucine-rich repeat 439..462 CDD:275380 9/22 (41%)
leucine-rich repeat 463..486 CDD:275380 7/24 (29%)
leucine-rich repeat 487..510 CDD:275380 8/28 (29%)
leucine-rich repeat 511..534 CDD:275380 6/25 (24%)
leucine-rich repeat 535..554 CDD:275380 7/22 (32%)
leucine-rich repeat 555..578 CDD:275380 7/22 (32%)
leucine-rich repeat 579..603 CDD:275380 1/23 (4%)
leucine-rich repeat 604..627 CDD:275380 2/22 (9%)
leucine-rich repeat 628..649 CDD:275380 2/20 (10%)
PPP1R42 631..849 CDD:455733 81/285 (28%)
leucine-rich repeat 652..672 CDD:275380 6/19 (32%)
leucine-rich repeat 700..726 CDD:275380 10/25 (40%)
leucine-rich repeat 727..745 CDD:275380 10/28 (36%)
leucine-rich repeat 779..802 CDD:275380 7/26 (27%)
leucine-rich repeat 829..852 CDD:275380 11/70 (16%)
Tlr8NP_001094479.1 leucine-rich repeat 62..85 CDD:275380 9/22 (41%)
LRR 75..481 CDD:443914 114/511 (22%)
leucine-rich repeat 86..119 CDD:275380 6/32 (19%)
leucine-rich repeat 120..140 CDD:275380 7/46 (15%)
leucine-rich repeat 141..164 CDD:275380 8/22 (36%)
leucine-rich repeat 165..194 CDD:275380 9/46 (20%)
leucine-rich repeat 195..215 CDD:275380 5/19 (26%)
leucine-rich repeat 216..239 CDD:275380 3/27 (11%)
leucine-rich repeat 240..280 CDD:275380 12/49 (24%)
leucine-rich repeat 281..304 CDD:275380 9/22 (41%)
leucine-rich repeat 305..324 CDD:275380 4/18 (22%)
leucine-rich repeat 331..387 CDD:275380 14/55 (25%)
leucine-rich repeat 388..411 CDD:275380 7/22 (32%)
leucine-rich repeat 467..494 CDD:275380 10/31 (32%)
leucine-rich repeat 495..510 CDD:275380 7/15 (47%)
LRR 498..>761 CDD:443914 80/276 (29%)
leucine-rich repeat 520..543 CDD:275380 10/25 (40%)
leucine-rich repeat 544..573 CDD:275380 10/37 (27%)
leucine-rich repeat 574..597 CDD:275380 8/22 (36%)
leucine-rich repeat 598..628 CDD:275380 10/29 (34%)
leucine-rich repeat 629..653 CDD:275380 9/24 (38%)
leucine-rich repeat 654..677 CDD:275380 2/22 (9%)
leucine-rich repeat 678..701 CDD:275380 5/22 (23%)
leucine-rich repeat 702..725 CDD:275380 4/22 (18%)
leucine-rich repeat 726..745 CDD:275380 6/18 (33%)
PCC 730..>813 CDD:188093 19/84 (23%)
TIR 868..1004 CDD:214587 10/44 (23%)
Blue background indicates that the domain is not in the aligned region.

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