DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and nrros

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_001003775.1 Gene:nrros / 445318 ZFINID:ZDB-GENE-040808-36 Length:685 Species:Danio rerio


Alignment Length:754 Identity:180/754 - (23%)
Similarity:292/754 - (38%) Gaps:229/754 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 QEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQI 234
            :||.....::......||..|.        |:......|||..:....|.....||.|::::|::
Zfish    60 EEIFFDRNLLENLQDGLSRYPF--------LRMFSCANNQLMTVAETAFIESHLLENLNLANNEL 116

  Fly   235 ---KKLEAQHIADLTKLGWCNVSHNALSELSRGTFARN-SVLKVLHLSHNQIARLDANSFRGMRF 295
               .|..||....||:|...::|.|.|||........| |.|:.|:||.|.:.|||.::||.:..
Zfish   117 HHGHKQVAQAFRSLTQLKTLDLSGNGLSEDMVSVLVANLSSLESLYLSRNGMQRLDESTFRDLHQ 181

  Fly   296 LRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLK-KIEFQMFTQMNYVELLDLAENNITKIEK 359
            |:.|.:..|:|.:|. |.|..:.::..::||.|.|. .:.|:| ||:                  
Zfish   182 LKELNVERNLLFEIS-GAFDHMKKLQRLNLAFNCLPCLVNFEM-TQL------------------ 226

  Fly   360 NSFKDIYQAIINVSHNALE-------LIETAAFENCVNITVLDLSHNRLANF------------- 404
                    .::|.|||::|       |.||...|      .||||.|.|..|             
Zfish   227 --------LVLNASHNSIEWFITNQNLTETFQLE------TLDLSDNHLLFFPFLPTNNQIRTLL 277

  Fly   405 -------------SRRSFDETTFATYFQLSYN--NLT------NLAQIPIQNMTGLKVLNASYNS 448
                         :..|.:.||...|:.|..|  |:|      ||.    .|::.::.|:.|.|.
Zfish   278 LSNNRVGFYQHLANSTSSNWTTSVDYYNLGQNISNITMDLWNENLH----GNLSSVEFLDLSENK 338

  Fly   449 ITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLE 513
            :...|:....::.:|:.:.:..|.:.|         |||.|.||.               .|:.|
Zfish   339 VNYFPQGFIKQMPQLYWLKLRSNCLQS---------FSLTSEDLP---------------VTIYE 379

  Fly   514 MDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNS 578
            :|:|.|           :||.::....:.|:|..|..|.:|.|:       |.|.|...:..:.:
Zfish   380 LDVSRN-----------RLTEIKASQTSKNKLNNLTHLNLSTND-------LQNFPPMIFTSLPN 426

  Fly   579 LIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLER 643
            |..||||||.: |.....::.||          :|..:     .:.|::|:.|:|.:.:|..:..
Zfish   427 LNTLDLSHNTV-DVCYSSNYMGL----------SGCVE-----WSSMASLKQLYLADCSIQNVPS 475

  Fly   644 SAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLT-LNLSSNGIQTLQNDIFVGLPSLRNLDLSF 707
            ||| |...|..|.|..|....:.:::.:||...|. |.:.:.|:|...   |....:|::|::|.
Zfish   476 SAF-KGTSLTHLELSNNPNLHLKQQSLKGLANTLQHLGIGNTGLQDFD---FSPYTNLKSLNISR 536

  Fly   708 NSLTKLDNKTNGVLDDL--LSLETLDLSHNRI--------SFVTKKTFPSHQYIPYNLRNLNLSY 762
            |||:||.       |.|  |:|:.|||..|.:        |.:.||.    |.:..|....|..:
Zfish   537 NSLSKLP-------DSLMALNLKLLDLRDNSLTTIKSEHASLLAKKL----QTVYMNGNAFNCCH 590

  Fly   763 NLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQ 827
                 |.:..|||..|                |:                        |:.||.:
Zfish   591 -----LDWFRTFGENK----------------GI------------------------HVADLSE 610

  Fly   828 NLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDV 866
             ::.|||::.:       :.|.:....|...|||:.|.|
Zfish   611 -ITCLDLNYRR-------HKVVLTDAVYCGFTNNNKESV 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380 2/4 (50%)
leucine-rich repeat 176..199 CDD:275380 3/22 (14%)
PPP1R42 191..359 CDD:455733 47/172 (27%)
LRR_8 198..258 CDD:404697 17/62 (27%)
leucine-rich repeat 200..223 CDD:275380 5/22 (23%)
leucine-rich repeat 224..271 CDD:275380 16/50 (32%)
leucine-rich repeat 272..295 CDD:275380 10/22 (45%)
leucine-rich repeat 296..319 CDD:275380 7/22 (32%)
leucine-rich repeat 322..343 CDD:275380 8/21 (38%)
leucine-rich repeat 344..367 CDD:275380 0/22 (0%)
LRR 346..718 CDD:443914 95/413 (23%)
leucine-rich repeat 371..390 CDD:275380 9/25 (36%)
leucine-rich repeat 391..414 CDD:275380 9/48 (19%)
leucine-rich repeat 416..438 CDD:275380 8/29 (28%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 3/22 (14%)
leucine-rich repeat 487..510 CDD:275380 4/22 (18%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..554 CDD:275380 4/18 (22%)
leucine-rich repeat 555..578 CDD:275380 4/22 (18%)
leucine-rich repeat 579..603 CDD:275380 10/23 (43%)
leucine-rich repeat 604..627 CDD:275380 2/22 (9%)
leucine-rich repeat 628..649 CDD:275380 7/20 (35%)
PPP1R42 631..849 CDD:455733 52/228 (23%)
leucine-rich repeat 652..672 CDD:275380 4/19 (21%)
leucine-rich repeat 700..726 CDD:275380 10/27 (37%)
leucine-rich repeat 727..745 CDD:275380 8/25 (32%)
leucine-rich repeat 779..802 CDD:275380 1/22 (5%)
leucine-rich repeat 829..852 CDD:275380 4/22 (18%)
nrrosNP_001003775.1 LRR <44..387 CDD:443914 97/407 (24%)
LRR 1. /evidence=ECO:0000255 57..79 4/18 (22%)
LRR 2. /evidence=ECO:0000255 80..102 6/29 (21%)
LRR 3. /evidence=ECO:0000255 103..129 7/25 (28%)
LRR 4. /evidence=ECO:0000255 130..154 8/23 (35%)
leucine-rich repeat 133..181 CDD:275380 18/47 (38%)
LRR 5. /evidence=ECO:0000255 155..178 10/22 (45%)
LRR 6. /evidence=ECO:0000255 180..201 7/21 (33%)
leucine-rich repeat 182..204 CDD:275380 7/22 (32%)
LRR 7. /evidence=ECO:0000255 202..225 6/23 (26%)
leucine-rich repeat 205..250 CDD:275380 16/71 (23%)
LRR 224..573 CDD:443914 106/453 (23%)
LRR 8. /evidence=ECO:0000255 248..271 9/28 (32%)
leucine-rich repeat 251..272 CDD:275380 8/26 (31%)
leucine-rich repeat 273..300 CDD:275380 2/26 (8%)
LRR 9. /evidence=ECO:0000255 273..296 1/22 (5%)
leucine-rich repeat 301..324 CDD:275380 7/26 (27%)
LRR 10. /evidence=ECO:0000255 326..349 4/22 (18%)
leucine-rich repeat 332..352 CDD:275380 4/19 (21%)
LRR 11. /evidence=ECO:0000255 351..373 7/30 (23%)
LRR 12. /evidence=ECO:0000255 374..397 7/48 (15%)
leucine-rich repeat 377..402 CDD:275380 8/35 (23%)
LRR 13. /evidence=ECO:0000255 400..423 8/29 (28%)
leucine-rich repeat 403..426 CDD:275380 7/29 (24%)
LRR 14. /evidence=ECO:0000255 425..447 8/22 (36%)
leucine-rich repeat 427..459 CDD:275380 12/47 (26%)
LRR 15. /evidence=ECO:0000255 457..480 8/23 (35%)
leucine-rich repeat 460..482 CDD:275380 8/22 (36%)
LRR 16. /evidence=ECO:0000255 482..503 4/20 (20%)
leucine-rich repeat 483..506 CDD:275380 6/22 (27%)
LRR 17. /evidence=ECO:0000255 505..526 5/23 (22%)
leucine-rich repeat 508..528 CDD:275380 5/22 (23%)
LRR 18. /evidence=ECO:0000255 527..549 10/28 (36%)
leucine-rich repeat 529..550 CDD:275380 10/27 (37%)
LRR 19. /evidence=ECO:0000255 551..571 5/19 (26%)
LRR 20. /evidence=ECO:0000255 573..596 6/31 (19%)
Blue background indicates that the domain is not in the aligned region.

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