DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and 2mit

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster


Alignment Length:881 Identity:188/881 - (21%)
Similarity:317/881 - (35%) Gaps:241/881 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 AQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARL-----DANSFRG------ 292
            |.|:.|:.      .|....:|......:|..|.:   ||:..|.|:     :.:||||      
  Fly    28 AAHLVDIP------TSSRLAAEREEQQLSRQDVGR---LSYQSIHRMLRDENEPDSFRGELRYQQ 83

  Fly   293 MRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLK---------KIEFQMFTQMNYVELLD 348
            .|..|.|.|:               |....::|....|:         |.:||:.|.|      |
  Fly    84 KRHKRELELN---------------APANKLNLTHRDLRTFNSTGGQWKGDFQVITAM------D 127

  Fly   349 LAENNITKIEKNSFKDIYQAIINVSHNALELIETAAFENCVNI--TVLDLSHNRLANFSRRSFDE 411
            |:.|.:..:..::|..:.|  :::.:|:||:|..:..:..:::  ..||||.|:.:..|...|  
  Fly   128 LSSNQLESLSLDNFNQLRQ--LDLGNNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFF-- 188

  Fly   412 TTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSI 476
                                 .|.:..||.||.::|.:..|.:..|..|.||.|:.:||||||.|
  Fly   189 ---------------------AQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDI 232

  Fly   477 FNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLN 541
            ....|..|.:|:.:|||||.:..........:|.|:.:.:::|..|.|.........||::|..:
  Fly   233 DYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDAS 297

  Fly   542 NNQLEKLFQLPISLNE----LYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLL 602
            ..   .|.|:|.:|.:    |..|.|.|..|..|.......|.||||||:::.. :..::...|.
  Fly   298 GT---GLCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQ-VEDDALGRLE 358

  Fly   603 VVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISK 667
            :::.|.|..|.:.:.|.   ::..:|::|.|::|.|..|...||..|..|..|:|..|::..:..
  Fly   359 LLESLFLDRNLLMRVPS---SLPPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLPP 420

  Fly   668 RAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSL----- 727
            .:   |.:||||||.|:|::::...|...||.||:|.|..|.:.         ..|||.:     
  Fly   421 LS---LPKLLTLNLESSGVESVSQSIVHTLPQLRDLLLEDNPIK---------CSDLLGIAEWAS 473

  Fly   728 --ETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQIN 790
              .::|...:..:.|:.:.....:|:.:                                ||   
  Fly   474 PCRSVDAGQSNGASVSGRVDLKTEYLQF--------------------------------HN--- 503

  Fly   791 DLRRGVISNFTSLQ------SLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVK 849
                 ...||:|.:      ..|......|..::...:...|:::|                  |
  Fly   504 -----FYENFSSRECGIRKPENDTKPPSCSLTRASATLTTTPRSMS------------------K 545

  Fly   850 VKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLHCGCNARPLKYFMLQQTIAGEDLKSIY 914
            |:..:....|..|:|...|:...|.:.|.|...|.........|.       ::.|| ....|..
  Fly   546 VEKSQEAQATATSVEVAAATAATSEKTGIQATSAAQSTAAATTAE-------REAIA-TATSSDT 602

  Fly   915 CGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQLTDVRFREVKTNKAGMLTLCWYVSGFSD 979
            ..||.|.....:.|                .|....|||....|..:|.....|.....:.|.. 
  Fly   603 TATPTLAAAAAIQS----------------AGNIPAQLTTKTLRPTETTSLAQLQRRQQMPGMP- 650

  Fly   980 VSDFHVYIRSSSNDVLHQSDYAYNNRTAQIPVEELSTLGEEKLRGAEICIVSRD---------SD 1035
                                    .:|.:.|.:.|.:|.:.|...|...:.:||         ||
  Fly   651 ------------------------AKTTETPAKNLPSLAQTKATTALPILATRDAATATTEINSD 691

  Fly  1036 GNTRKWFSGQCQQL----------PSLKRPRTFFFG 1061
            ..|.  .||..:.:          |:::.|:|...|
  Fly   692 KPTN--ISGATKTVATSAAEIATPPAIEVPQTILAG 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
LRR_8 198..258 CDD:290566 4/18 (22%)
leucine-rich repeat 200..223 CDD:275380
LRR_RI 201..545 CDD:238064 78/327 (24%)
leucine-rich repeat 224..271 CDD:275380 6/31 (19%)
LRR_8 245..306 CDD:290566 16/71 (23%)
leucine-rich repeat 272..295 CDD:275380 8/33 (24%)
LRR_8 296..354 CDD:290566 14/66 (21%)
leucine-rich repeat 296..319 CDD:275380 3/22 (14%)
LRR_8 322..401 CDD:290566 21/89 (24%)
leucine-rich repeat 322..343 CDD:275380 7/29 (24%)
leucine-rich repeat 344..367 CDD:275380 4/22 (18%)
leucine-rich repeat 371..390 CDD:275380 4/18 (22%)
leucine-rich repeat 391..414 CDD:275380 7/24 (29%)
leucine-rich repeat 416..438 CDD:275380 1/21 (5%)
LRR_8 437..495 CDD:290566 24/57 (42%)
leucine-rich repeat 439..462 CDD:275380 8/22 (36%)
leucine-rich repeat 463..486 CDD:275380 11/22 (50%)
LRR_RI 486..738 CDD:238064 70/262 (27%)
LRR_8 486..545 CDD:290566 14/58 (24%)
leucine-rich repeat 487..510 CDD:275380 6/22 (27%)
leucine-rich repeat 511..534 CDD:275380 4/22 (18%)
leucine-rich repeat 535..554 CDD:275380 5/18 (28%)
LRR_8 554..614 CDD:290566 18/63 (29%)
leucine-rich repeat 555..578 CDD:275380 7/26 (27%)
leucine-rich repeat 579..603 CDD:275380 8/23 (35%)
leucine-rich repeat 604..627 CDD:275380 4/22 (18%)
LRR_8 626..710 CDD:290566 30/83 (36%)
leucine-rich repeat 628..649 CDD:275380 8/20 (40%)
leucine-rich repeat 652..672 CDD:275380 4/19 (21%)
LRR_8 698..765 CDD:290566 12/73 (16%)
leucine-rich repeat 700..726 CDD:275380 7/25 (28%)
leucine-rich repeat 727..745 CDD:275380 2/24 (8%)
LRR_8 777..839 CDD:290566 9/67 (13%)
leucine-rich repeat 779..802 CDD:275380 4/22 (18%)
leucine-rich repeat 829..852 CDD:275380 3/22 (14%)
2mitNP_001262529.1 LRR_RI 124..355 CDD:238064 70/265 (26%)
leucine-rich repeat 124..143 CDD:275380 6/24 (25%)
leucine-rich repeat 144..167 CDD:275380 5/24 (21%)
leucine-rich repeat 172..194 CDD:275380 8/44 (18%)
LRR_8 193..253 CDD:290566 26/59 (44%)
leucine-rich repeat 195..218 CDD:275380 8/22 (36%)
leucine-rich repeat 219..242 CDD:275380 11/22 (50%)
LRR_8 241..301 CDD:290566 14/62 (23%)
leucine-rich repeat 243..311 CDD:275380 18/70 (26%)
leucine-rich repeat 312..335 CDD:275380 6/22 (27%)
LRR_8 334..415 CDD:290566 25/84 (30%)
leucine-rich repeat 336..359 CDD:275380 8/23 (35%)
leucine-rich repeat 360..380 CDD:275380 4/22 (18%)
LRR_8 379..460 CDD:290566 30/83 (36%)
LRR_4 379..>415 CDD:289563 13/35 (37%)
leucine-rich repeat 381..404 CDD:275380 9/22 (41%)
leucine-rich repeat 405..449 CDD:275380 15/46 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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