DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and CG7800

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster


Alignment Length:621 Identity:144/621 - (23%)
Similarity:249/621 - (40%) Gaps:137/621 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 IADLTKLG------WCNVSHNALSELSRGTFARNSVLKV--LHLS--HNQIARLDANSFRGMRFL 296
            :|.::.||      :||.|:..|...|| ||:.....|:  .|:.  ..::.:|..|       |
  Fly     9 LASVSALGRPDLEDYCNDSYCHLLGRSR-TFSDKKATKLTEFHMDSCEKKVLKLMPN-------L 65

  Fly   297 RRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNS 361
            |.|.|.:....|........:..:.::.|.|..|..:..:.|::...:::|.|..||||::....
  Fly    66 RTLELENCDSPDFTMNDLNQLPYLTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLSNEC 130

  Fly   362 FKDIYQA-IINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNL 425
            ||.:.|. ::::..|.::.:....|:|...:..||||.||:.......|..........|:.|.|
  Fly   131 FKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNGNPL 195

  Fly   426 TNLAQIPIQNMTGLKVLNASYNSITEIPKNCFP----KLYELHTIDVSHNNISSIFNGVFQTLFS 486
            |.:|...:::::.|::|:.|         ||.|    .|...||:.:.::.:..:     ..|.|
  Fly   196 TWIAPTSLKSLSNLRLLDMS---------NCGPLPDLSLPGAHTLILDNSGVQRL-----DILGS 246

  Fly   487 LRSIDLSHNSMREIKSSTFGTLP---TLLEMDLSHNELVSV-VRGSLAKLTSLRQLYLNNN---- 543
            :..:....|.:.|||      ||   :::|:||..|.|.:. :...|..:..|::|.|:.|    
  Fly   247 VHKLQARKNHITEIK------LPDKSSVIELDLHSNLLTATDIPKLLTGMWRLQRLDLSENIIGI 305

  Fly   544 -------QLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGL 601
                   ...:||.|| :|..:..|.||||.:...:......|.:||.|:|:             
  Fly   306 YAAAGSDNTSELFILP-NLMYMNLSANRLTRLHFDSPIPWERLTHLDASYNR------------- 356

  Fly   602 LVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQ----- 661
                        |..|.|..:.....||.||||.|.|...|.:.:...|.|.|:.||.|:     
  Fly   357 ------------IYAPAKVGIDEAFNLQSLHLEGNYINNFELTPWKPHPSLKEVALYDNKFQPKG 409

  Fly   662 VKDISKRAFE---GLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTK--LDNKTNGVL 721
            .|:|:|...|   .:|:....:.|:|...|.:..|    |..|:...|.::.|.  :|.|.|.:.
  Fly   410 YKNITKFFNEIGVNVLEKTQYSQSNNTTPTCKPCI----PDARDFPTSISADTNQTIDTKVNPLS 470

  Fly   722 DDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSH 786
            :|                       ::|   :|:.|:.:..:|:..|..: :|...||:||    
  Fly   471 ND-----------------------TYQ---WNVWNVLMLVSLIVSLFVN-SFLIVKLIRL---- 504

  Fly   787 NQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHI 822
                   || .:.||...|:.......||...:|.|
  Fly   505 -------RG-RNQFTQSSSVPAIIEMFSNESDDEII 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733 30/126 (24%)
LRR_8 198..258 CDD:404697 6/21 (29%)
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380 11/34 (32%)
leucine-rich repeat 272..295 CDD:275380 4/26 (15%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
leucine-rich repeat 322..343 CDD:275380 4/20 (20%)
leucine-rich repeat 344..367 CDD:275380 8/22 (36%)
LRR 346..718 CDD:443914 99/401 (25%)
leucine-rich repeat 371..390 CDD:275380 3/18 (17%)
leucine-rich repeat 391..414 CDD:275380 7/22 (32%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
leucine-rich repeat 439..462 CDD:275380 7/26 (27%)
leucine-rich repeat 463..486 CDD:275380 3/22 (14%)
leucine-rich repeat 487..510 CDD:275380 6/25 (24%)
leucine-rich repeat 511..534 CDD:275380 6/23 (26%)
leucine-rich repeat 535..554 CDD:275380 8/29 (28%)
leucine-rich repeat 555..578 CDD:275380 6/22 (27%)
leucine-rich repeat 579..603 CDD:275380 5/23 (22%)
leucine-rich repeat 604..627 CDD:275380 3/22 (14%)
leucine-rich repeat 628..649 CDD:275380 9/20 (45%)
PPP1R42 631..849 CDD:455733 49/202 (24%)
leucine-rich repeat 652..672 CDD:275380 9/27 (33%)
leucine-rich repeat 700..726 CDD:275380 7/27 (26%)
leucine-rich repeat 727..745 CDD:275380 0/17 (0%)
leucine-rich repeat 779..802 CDD:275380 6/22 (27%)
leucine-rich repeat 829..852 CDD:275380
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 2/17 (12%)
leucine-rich repeat 65..85 CDD:275380 5/19 (26%)
LRR 68..482 CDD:443914 111/489 (23%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 8/22 (36%)
leucine-rich repeat 137..160 CDD:275380 3/22 (14%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..246 CDD:275380 10/50 (20%)
leucine-rich repeat 247..267 CDD:275380 6/25 (24%)
leucine-rich repeat 268..292 CDD:275380 6/23 (26%)
leucine-rich repeat 293..322 CDD:275380 8/29 (28%)
leucine-rich repeat 395..406 CDD:275378 5/10 (50%)
Blue background indicates that the domain is not in the aligned region.

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