DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and tlr4ba

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_009305503.2 Gene:tlr4ba / 403131 ZFINID:ZDB-GENE-040219-8 Length:824 Species:Danio rerio


Alignment Length:716 Identity:154/716 - (21%)
Similarity:282/716 - (39%) Gaps:169/716 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 SHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRG---TFG 315
            |.|...:|.:..|...|.|:||.||...|.:::.::|..::.|..|||:.|.:.....|   |..
Zfish    59 SFNFFLQLKKTIFPVLSFLRVLDLSRCHIRQIENDAFYNVKNLTTLFLTGNPIIYFAPGCLNTLY 123

  Fly   316 SIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSHNALELI 380
            ::.|:..:|:.                 :|.|.|..||:||:::          :||..|.::.:
Zfish   124 NLQRLVLVDIG-----------------LESLQLNINNLTKLQE----------LNVGTNYIQSM 161

  Fly   381 ETAAFENCV-NITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNA 444
            ....|.... :.::|||..|   |.|....|.|..             |.:|. :|||    |..
Zfish   162 TLPPFMTTFKDFSLLDLHAN---NISIIRTDHTVV-------------LREIG-RNMT----LIL 205

  Fly   445 SYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSH---------NSMREI 500
            ::|.:..|....|..:| |..:|:....:|  |:.....|.:|..:::..         |....:
Zfish   206 TWNPLLHIEPGAFKDVY-LRQLDIRSAFVS--FSAQKAALKALHGLNVKRLIFGKYREDNGFHFV 267

  Fly   501 KSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLT-SLRQLYLNNNQLE----KLFQLPI----SLN 556
            .:.....|......::|:..|.|      ||.| ::.:..:|..::.    .:|::..    ...
Zfish   268 DNDVLDGLCCFNFQEVSYYVLES------AKTTIAIFRCMINATRITVKGGNIFKMETVHFHKTK 326

  Fly   557 ELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDA 621
            |||..:|.|..:|:.....:::|..|:::||  .:.:..|.||.|                ||  
Zfish   327 ELYLINNGLGTLPTKQLSHLHTLEKLEITHN--SEPIFAEPFTDL----------------PK-- 371

  Fly   622 VAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGI 686
                  |||:.|.:|.:                      ::|........|..|:..||||.|..
Zfish   372 ------LQYVDLSDNQL----------------------KIKHCCSTLLSGTPQINYLNLSLNSE 408

  Fly   687 QTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYI 751
            .::....|.||.||..||.|:..:.::...:  ||.:|.:|..||:|::.::|       |:.:.
Zfish   409 ISVDVGGFEGLDSLEILDFSYTRVVRIGYLS--VLSNLKNLRYLDVSYSSVTF-------SNIFC 464

  Fly   752 PYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQI-NDLRRGVISNFTSLQSLDMSYNELSN 815
            ...|.:||:                     |.::.|.. .::.:.|.:|.|.|:.||||:..|..
Zfish   465 FLGLSSLNV---------------------LKMAGNNFQGNVAKYVFNNLTLLEHLDMSFCHLVE 508

  Fly   816 LKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSM-RNGSQ 879
            |.:..  |...|.|..|::..|.:..:.|.....:|.|....:..||:..:|..::.:: .|.|:
Zfish   509 LHTSS--FKYLQRLRHLNVKGNYLIKIDFLTHPNLKQLTSFYVEKNSITAIPLHVLQNLPMNLSE 571

  Fly   880 VLLAGNPLHCGCNARPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMY 944
            ..|:.||:.|.|:......:::......:..::|.|.|.:...|.::...|.:  ||      :|
Zfish   572 FDLSFNPIDCSCSQTDFMLWIINNQRVLKQPENILCKTISPNSDFRVTDFDID--HC------VY 628

  Fly   945 K 945
            |
Zfish   629 K 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733 28/107 (26%)
LRR_8 198..258 CDD:404697 2/3 (67%)
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380 4/16 (25%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 7/25 (28%)
leucine-rich repeat 322..343 CDD:275380 1/20 (5%)
leucine-rich repeat 344..367 CDD:275380 7/22 (32%)
LRR 346..718 CDD:443914 81/390 (21%)
leucine-rich repeat 371..390 CDD:275380 4/19 (21%)
leucine-rich repeat 391..414 CDD:275380 8/22 (36%)
leucine-rich repeat 416..438 CDD:275380 4/21 (19%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 5/22 (23%)
leucine-rich repeat 487..510 CDD:275380 3/31 (10%)
leucine-rich repeat 511..534 CDD:275380 6/23 (26%)
leucine-rich repeat 535..554 CDD:275380 2/26 (8%)
leucine-rich repeat 555..578 CDD:275380 6/22 (27%)
leucine-rich repeat 579..603 CDD:275380 8/23 (35%)
leucine-rich repeat 604..627 CDD:275380 2/22 (9%)
leucine-rich repeat 628..649 CDD:275380 5/20 (25%)
PPP1R42 631..849 CDD:455733 48/218 (22%)
leucine-rich repeat 652..672 CDD:275380 1/19 (5%)
leucine-rich repeat 700..726 CDD:275380 7/25 (28%)
leucine-rich repeat 727..745 CDD:275380 5/17 (29%)
leucine-rich repeat 779..802 CDD:275380 4/23 (17%)
leucine-rich repeat 829..852 CDD:275380 4/22 (18%)
tlr4baXP_009305503.2 None
Blue background indicates that the domain is not in the aligned region.

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