DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and CG4950

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster


Alignment Length:529 Identity:132/529 - (24%)
Similarity:241/529 - (45%) Gaps:54/529 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 TQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLAN 403
            |....|.:.::...|:.|     |...|::  .:.:....|.||..:     :..||:|:..:..
  Fly    56 THSQNVVIKNIPPGNMVK-----FMKFYES--TLLYMPFHLFETFPY-----LKTLDVSNTNILE 108

  Fly   404 FSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDV 468
            .:|.:|...:..||..|:|||||::..........|..|:.|||.|:.:..|.|..|:.:..|.:
  Fly   109 LTRNAFSAASNLTYLNLAYNNLTSIQTSVFIGANVLMRLDLSYNEISSLSVNAFCGLHTISQIYL 173

  Fly   469 SHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLT 533
            :.|.:..:.|.:|:....|..:....|.:..|:...|..:..:.|::||:|.|:.:...:.|...
  Fly   174 TGNLLKELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHPDTFADAA 238

  Fly   534 SLRQLYLNNNQLEKLFQLPIS--LNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGE 596
            ||..|.|:.|:| |.|||...  :::|:..:|.|||:      .:|:..::..||||:.:....:
  Fly   239 SLENLVLSYNEL-KNFQLTEKNIVHQLHLDNNYLTNL------TINATRFVRASHNQISELFLHQ 296

  Fly   597 SFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQ 661
            |    |.::.|.|..|.:|....  :..::.:.||.:.:|.|..|..|.|.:|..|..|||.|..
  Fly   297 S----LHIETLDLSANKLSSISN--ITNITHMLYLDVSDNPIGPLNISTFSQLKRLRGLNLRGTG 355

  Fly   662 VKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLD---LSFNSLTKLD-NKTNGVLD 722
            ::::....|.....|..|:||.|.:..|..|:||  |.|.||.   :..|.||:|. |:|  ..:
  Fly   356 IRELKFGMFSKQKYLEELDLSFNNLTILNLDMFV--PYLTNLKKFLIDGNGLTELQGNRT--FSE 416

  Fly   723 DLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHN 787
            ....|:.|.:|.||.:.    ::..|..||.:|.. ::..|:.|....|.|...:.:..:..|..
  Fly   417 AFPQLQKLGVSRNRFNC----SYLHHLLIPPSLPE-SVVLNIEPDTNLDETPHIRDVSCISQSQE 476

  Fly   788 QINDLRRGVISNFTSLQS-----LDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANL 847
            .:|       ::||:.:|     :.|...:|..:.|  |..:|..:|:::.:....:..|....:
  Fly   477 VVN-------ASFTAEESKLESQIQMLSKQLDIVGS--HSKNLELHLAFMQIFAYVMGGLVLVGV 532

  Fly   848 VKVKSLKYV 856
            |.:.:|:|:
  Fly   533 VSLITLRYL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
LRR_8 198..258 CDD:290566
leucine-rich repeat 200..223 CDD:275380
LRR_RI 201..545 CDD:238064 50/205 (24%)
leucine-rich repeat 224..271 CDD:275380
LRR_8 245..306 CDD:290566
leucine-rich repeat 272..295 CDD:275380
LRR_8 296..354 CDD:290566 2/14 (14%)
leucine-rich repeat 296..319 CDD:275380
LRR_8 322..401 CDD:290566 12/61 (20%)
leucine-rich repeat 322..343 CDD:275380 1/3 (33%)
leucine-rich repeat 344..367 CDD:275380 4/22 (18%)
leucine-rich repeat 371..390 CDD:275380 3/18 (17%)
leucine-rich repeat 391..414 CDD:275380 5/22 (23%)
leucine-rich repeat 416..438 CDD:275380 8/21 (38%)
LRR_8 437..495 CDD:290566 14/57 (25%)
leucine-rich repeat 439..462 CDD:275380 9/22 (41%)
leucine-rich repeat 463..486 CDD:275380 4/22 (18%)
LRR_RI 486..738 CDD:238064 74/257 (29%)
LRR_8 486..545 CDD:290566 15/58 (26%)
leucine-rich repeat 487..510 CDD:275380 4/22 (18%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
leucine-rich repeat 535..554 CDD:275380 9/18 (50%)
LRR_8 554..614 CDD:290566 15/61 (25%)
leucine-rich repeat 555..578 CDD:275380 5/22 (23%)
leucine-rich repeat 579..603 CDD:275380 5/23 (22%)
leucine-rich repeat 604..627 CDD:275380 4/22 (18%)
LRR_8 626..710 CDD:290566 28/86 (33%)
leucine-rich repeat 628..649 CDD:275380 7/20 (35%)
leucine-rich repeat 652..672 CDD:275380 6/19 (32%)
LRR_8 698..765 CDD:290566 20/70 (29%)
leucine-rich repeat 700..726 CDD:275380 9/29 (31%)
leucine-rich repeat 727..745 CDD:275380 5/17 (29%)
LRR_8 777..839 CDD:290566 11/66 (17%)
leucine-rich repeat 779..802 CDD:275380 3/22 (14%)
leucine-rich repeat 829..852 CDD:275380 3/22 (14%)
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380 5/22 (23%)
LRR_8 118..178 CDD:290566 19/59 (32%)
leucine-rich repeat 120..143 CDD:275380 8/22 (36%)
leucine-rich repeat 144..167 CDD:275380 9/22 (41%)
leucine-rich repeat 168..191 CDD:275380 4/22 (18%)
LRR_8 192..250 CDD:290566 15/57 (26%)
leucine-rich repeat 192..215 CDD:275380 4/22 (18%)
LRR_RI <207..432 CDD:238064 71/241 (29%)
leucine-rich repeat 216..239 CDD:275380 6/22 (27%)
leucine-rich repeat 240..299 CDD:275380 20/69 (29%)
LRR_8 299..356 CDD:290566 17/58 (29%)
leucine-rich repeat 300..321 CDD:275380 4/22 (18%)
leucine-rich repeat 322..345 CDD:275380 8/22 (36%)
LRR_8 344..405 CDD:290566 20/62 (32%)
leucine-rich repeat 346..365 CDD:275380 5/18 (28%)
leucine-rich repeat 370..394 CDD:275380 11/25 (44%)
leucine-rich repeat 395..420 CDD:275380 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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