DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and Con

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster


Alignment Length:565 Identity:131/565 - (23%)
Similarity:230/565 - (40%) Gaps:135/565 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 KLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVS 523
            :|.||..:..::..:..|...:.:.|.:|.||.:.::.:..:||..|..||.|..:.|::|.:::
  Fly   157 RLRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMA 221

  Fly   524 VVRGSLAKLTSLRQLYLNNNQLEKLFQ-----LPISLNELYFSHNRLTNIPSGTWPVMNSLIYLD 583
            :.:.:.|....||:|.|.:||:.::.:     ||: ...|:.::|.::.:..|.:..|..|.:|:
  Fly   222 LDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPL-CERLFLNNNNISTLHEGLFADMARLTFLN 285

  Fly   584 LSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGK 648
            |:|||: :.|..|.|.||                        ..|..|.|..||:..:..:.|.:
  Fly   286 LAHNQI-NVLTSEIFRGL------------------------GNLNVLKLTRNNLNFIGDTVFAE 325

  Fly   649 LPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKL 713
            |..|.||.|..|:::.||:||.:||..|.||||.:|.::.:.|.:..|.|:|.::::..|     
  Fly   326 LWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQAN----- 385

  Fly   714 DNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKK 778
                        .||||             ||.:.|.|..||.|                 .|.:
  Fly   386 ------------KLETL-------------TFYTFQPIMDNLVN-----------------STSE 408

  Fly   779 LVRLDVSHNQ-INDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHL 842
            |:   ||.|: |.|.|         ||.:....|...:|:..:.:.||...|....||| .:..:
  Fly   409 LL---VSDNKFICDCR---------LQWIFELKNRTRHLQLRDSLEDLHCTLQEPKLSH-FVDPV 460

  Fly   843 P--FANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLHCGCNARPL----KYF-- 899
            |  ..:::.:.....:...:.|:..|..|:|||..:|  :.:..:..|.|..:|..    :.|  
  Fly   461 PPTILDVLNIGGFTAIGSNSASMGGVGNSVVGSSYSG--LTMDDSRKHLGSRSRQALRGQRQFAS 523

  Fly   900 --------------MLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYE 950
                          ..|:.:..:||.::   .||   .|:....||.     .....:..|:|.:
  Fly   524 SAENVVESKMRRRRKRQEEVKEKDLAAV---APA---HKRYDYYDDN-----NGGMSLGHGLDLD 577

  Fly   951 QLTDVRFREVKTNKAGMLTLCWYVSGFSDVSDFHVYIRSSSNDVL 995
            .       .:..:|.|.......|.|.:|| |..:...|:|.|.|
  Fly   578 D-------NLSLHKQGFYGAGSPVVGHNDV-DVLMTSHSASGDAL 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733
LRR_8 198..258 CDD:404697
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
LRR 346..718 CDD:443914 69/263 (26%)
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 416..438 CDD:275380
leucine-rich repeat 439..462 CDD:275380 1/2 (50%)
leucine-rich repeat 463..486 CDD:275380 3/22 (14%)
leucine-rich repeat 487..510 CDD:275380 7/22 (32%)
leucine-rich repeat 511..534 CDD:275380 4/22 (18%)
leucine-rich repeat 535..554 CDD:275380 8/23 (35%)
leucine-rich repeat 555..578 CDD:275380 4/22 (18%)
leucine-rich repeat 579..603 CDD:275380 11/23 (48%)
leucine-rich repeat 604..627 CDD:275380 0/22 (0%)
leucine-rich repeat 628..649 CDD:275380 6/20 (30%)
PPP1R42 631..849 CDD:455733 58/220 (26%)
leucine-rich repeat 652..672 CDD:275380 9/19 (47%)
leucine-rich repeat 700..726 CDD:275380 2/25 (8%)
leucine-rich repeat 727..745 CDD:275380 4/17 (24%)
leucine-rich repeat 779..802 CDD:275380 7/23 (30%)
leucine-rich repeat 829..852 CDD:275380 5/24 (21%)
ConNP_523930.3 LRR <157..459 CDD:443914 98/387 (25%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 4/22 (18%)
leucine-rich repeat 233..256 CDD:275380 7/22 (32%)
leucine-rich repeat 257..280 CDD:275380 4/22 (18%)
leucine-rich repeat 281..304 CDD:275380 11/47 (23%)
leucine-rich repeat 305..328 CDD:275380 7/22 (32%)
leucine-rich repeat 329..352 CDD:275380 11/22 (50%)
leucine-rich repeat 353..376 CDD:275380 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.

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