DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and Gp150

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster


Alignment Length:848 Identity:195/848 - (22%)
Similarity:332/848 - (39%) Gaps:190/848 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 ADLTKLGWCNVSHNALSELSRGTFARNSVLK---VLHLSHNQIARLDANSFRGMRFLRRLFLSDN 304
            :|:|.|...||... ...|....|.:|..||   .:.:::..:..|.|.:|.|:..|..:.|:|.
  Fly   288 SDITDLVVTNVGPK-YPILMGPNFFQNLGLKNVASIKIANCTLEYLHAEAFHGLNELYAVNLTDV 351

  Fly   305 VLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNY------VELLDLAENNITKIEKNSFK 363
            .|..|...||....::..:.::.|     :..:.:.::|      :|.||.:.||:.::...:|.
  Fly   352 GLAIINPDTFVGNKKLRMLTISGN-----DLSVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFS 411

  Fly   364 DIYQAI-INVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTN 427
            .:...: ||:|.|:|:.:...|||....:..||||:|.|....|..|:.||. :...|.||....
  Fly   412 HLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTTL-SILHLKYNTFNG 475

  Fly   428 LAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDL 492
            ......::   |:.|:.|:|||.::..:.|.|:..|..:::..|.|..|....|.||.:||.|||
  Fly   476 DLHFGTKD---LQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDL 537

  Fly   493 SHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNE 557
            |.|.:.:|....|          ..::|| .|:|             ||:|  .:|.|||   .:
  Fly   538 SINDLDQISGMLF----------FKNSEL-DVIR-------------LNDN--PRLSQLP---TD 573

  Fly   558 LYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAV 622
            .:.|:       ||.:.|    .|||:|:..:| .|..::|:.:..:..|||..|.|:..|::..
  Fly   574 GFLSY-------SGEFTV----YYLDISNCAIG-PLGHKAFSTMPHLTTLKLAWNNINHLPREIF 626

  Fly   623 AVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQ 687
            ..:..|..|.|.||.||.::...|.....|.:|:|.||.:..:|.|.|..|.||..|:::...:.
  Fly   627 TGLHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELT 691

  Fly   688 TLQNDIFVG-----LPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPS 747
            ||.:|..:|     ..|||:.:.|.|.:.|:.::.   :....:|.:||:::|.:     |..|.
  Fly   692 TLLSDRDLGAGYKIFDSLRSFNASGNLIKKISSED---VKSFKNLRSLDITNNPL-----KCTPD 748

  Fly   748 HQ-YIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYN 811
            .| :|.|....:.::...:|:                                            
  Fly   749 FQEFISYVTLQMQMTPKRLPV-------------------------------------------- 769

  Fly   812 ELSNLKSEEHIFDLP--QNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSM 874
             |:||:.:..|..|.  ....|..|:|....|...::|:..|.   .|.....||......|..:
  Fly   770 -LANLEDDATIVQLETLAQAGWSSLAHEVCKHAEGSDLLDEKK---ADSAEAKLEKRLKESVKKL 830

  Fly   875 RNGSQVLLAGNPLHCGCNARPLKYFMLQQTIAGE----DLKSIYCGTPALIKDKQLISLDDEYLH 935
            ......||:                :|.:::..:    .::.|..|:......|.....|:|.|:
  Fly   831 NEDEAKLLS----------------VLDKSVLDKSRLSSMQKIMKGSVNTETAKPEEDADEENLN 879

  Fly   936 --------------CAEDEQEMYKGIDYEQLTDVRFREVKTNKAGMLTLCWYVSGFSDVSD-FHV 985
                          ..||:.:..:..|.:...|.||.|.|.|          ....:|.:. |..
  Fly   880 NGGEDKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKN----------AKAKADANKAFDT 934

  Fly   986 YIRSSSNDVLHQSDYAYNNRTAQIPVEELSTLGE-------EKLRGAEICIVSRDSDGNTRKW-F 1042
            ::......||         :|..|..||:....|       ||| |.:  ..|.:||..|.|. |
  Fly   935 FVNKELKPVL---------KTDGIQAEEVDMSQETRDKFLLEKL-GFD--SESEESDEYTEKMIF 987

  Fly  1043 SGQ 1045
            .|:
  Fly   988 HGE 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
LRR_8 198..258 CDD:290566 5/14 (36%)
leucine-rich repeat 200..223 CDD:275380
LRR_RI 201..545 CDD:238064 81/311 (26%)
leucine-rich repeat 224..271 CDD:275380 8/27 (30%)
LRR_8 245..306 CDD:290566 16/63 (25%)
leucine-rich repeat 272..295 CDD:275380 6/25 (24%)
LRR_8 296..354 CDD:290566 13/63 (21%)
leucine-rich repeat 296..319 CDD:275380 7/22 (32%)
LRR_8 322..401 CDD:290566 21/85 (25%)
leucine-rich repeat 322..343 CDD:275380 1/20 (5%)
leucine-rich repeat 344..367 CDD:275380 6/22 (27%)
leucine-rich repeat 371..390 CDD:275380 7/18 (39%)
leucine-rich repeat 391..414 CDD:275380 9/22 (41%)
leucine-rich repeat 416..438 CDD:275380 3/21 (14%)
LRR_8 437..495 CDD:290566 21/57 (37%)
leucine-rich repeat 439..462 CDD:275380 8/22 (36%)
leucine-rich repeat 463..486 CDD:275380 7/22 (32%)
LRR_RI 486..738 CDD:238064 71/256 (28%)
LRR_8 486..545 CDD:290566 16/58 (28%)
leucine-rich repeat 487..510 CDD:275380 9/22 (41%)
leucine-rich repeat 511..534 CDD:275380 4/22 (18%)
leucine-rich repeat 535..554 CDD:275380 7/18 (39%)
LRR_8 554..614 CDD:290566 15/59 (25%)
leucine-rich repeat 555..578 CDD:275380 4/22 (18%)
leucine-rich repeat 579..603 CDD:275380 7/23 (30%)
leucine-rich repeat 604..627 CDD:275380 6/22 (27%)
LRR_8 626..710 CDD:290566 29/88 (33%)
leucine-rich repeat 628..649 CDD:275380 8/20 (40%)
leucine-rich repeat 652..672 CDD:275380 8/19 (42%)
LRR_8 698..765 CDD:290566 15/67 (22%)
leucine-rich repeat 700..726 CDD:275380 5/25 (20%)
leucine-rich repeat 727..745 CDD:275380 5/17 (29%)
LRR_8 777..839 CDD:290566 8/63 (13%)
leucine-rich repeat 779..802 CDD:275380 0/22 (0%)
leucine-rich repeat 829..852 CDD:275380 5/22 (23%)
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 13/64 (20%)
leucine-rich repeat 343..366 CDD:275380 7/22 (32%)
leucine-rich repeat 367..391 CDD:275380 2/28 (7%)
LRR_RI <374..619 CDD:238064 79/294 (27%)
LRR_8 390..450 CDD:290566 19/59 (32%)
leucine-rich repeat 393..415 CDD:275380 6/21 (29%)
leucine-rich repeat 416..439 CDD:275380 8/22 (36%)
leucine-rich repeat 440..483 CDD:275380 13/43 (30%)
leucine-rich repeat 463..481 CDD:275380 3/18 (17%)
LRR_8 484..542 CDD:290566 22/57 (39%)
leucine-rich repeat 484..507 CDD:275380 8/22 (36%)
leucine-rich repeat 508..531 CDD:275380 7/22 (32%)
leucine-rich repeat 532..569 CDD:275380 17/62 (27%)
leucine-rich repeat 556..583 CDD:275380 13/52 (25%)
leucine-rich repeat 570..607 CDD:275380 13/51 (25%)
LRR_RI <586..745 CDD:238064 47/167 (28%)
LRR_8 606..666 CDD:290566 19/59 (32%)
leucine-rich repeat 608..631 CDD:275380 6/22 (27%)
leucine-rich repeat 632..655 CDD:275380 8/22 (36%)
leucine-rich repeat 656..674 CDD:275380 7/17 (41%)
leucine-rich repeat 733..745 CDD:275378 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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