DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and CG5819

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_611660.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:710 Identity:171/710 - (24%)
Similarity:284/710 - (40%) Gaps:180/710 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 ANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLY----E 462
            |:.||||..     ||        .|...||:::      |:.|.|...|     ||.||    .
  Fly    38 ADCSRRSLQ-----TY--------PNFDGIPVEH------LDLSGNKFLE-----FPTLYADIDS 78

  Fly   463 LHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKS----STFGTLPTLLEMDLSHNELVS 523
            |..:|:|.|.||||.........|||::.|::||:...:|    ..|...|:|..:.|..|.|.|
  Fly    79 LIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDSWESLSPNEAFKYAPSLKRLGLDGNRLGS 143

  Fly   524 VVRGSLAKL---TSLRQLYLNN------------NQLEKLFQLPISLNELYFSHNRLTNIPSGTW 573
            ...|...:|   :||..|.|::            |||..|.:|.::.|:|    .::..:||.| 
  Fly   144 FGNGESFELLTSSSLTDLGLSSCGISSIGGDQMVNQLPNLERLNLANNQL----AQIAALPSRT- 203

  Fly   574 PVMNSLIYLDLSH----NQLGDTLNG-ESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHL 633
                 |..||||:    |..|..|:. ::...|.:.:..:||.:.:|:.|    .:...|:.|.:
  Fly   204 -----LRVLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFDSLSEDP----ILTYMLRKLDV 259

  Fly   634 ENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLP 698
            ...|:.::|.|.   ||.|.|:.|.||.::.:....|.....|..::||.|.::.:..|.|..|.
  Fly   260 SYCNLDSIELSG---LPQLTEVRLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRHIGQDAFAKLK 321

  Fly   699 SLRNLDLSFNSLTKLDN---KTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNL 760
            .|:.|:|:||.:.:||.   :.|.||.:      |:||.|.:..:||       .:..::|.:|:
  Fly   322 RLKELNLAFNEIARLDRNFIRNNDVLVE------LNLSRNVLQKLTK-------IVSNSVRTINM 373

  Fly   761 SYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDL 825
            |:                        .:|..:....:|:.:.:|.||:|.|.::::.:    |..
  Fly   374 SW------------------------CEITSIESTALSSLSVIQKLDLSNNLITDMPT----FMR 410

  Fly   826 PQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSL-EDVPASIVGSMRNGSQVLLAGNPLHC 889
            .:.|..|:|::.::..:......:...|..:.|..|.| ..:|.:.....:...|:.|..||..|
  Fly   411 SETLQQLNLANCRLTTVRNNTFREFPELADLHLNGNRLTSPIPPNYFDGNKFLDQLWLGDNPWIC 475

  Fly   890 GCNARPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQL-- 952
            .|:: ||  |:        |........||.|||:       .:|.||.      ..:.|.:|  
  Fly   476 DCHS-PL--FV--------DFYDYLTAKPAKIKDR-------NHLRCAA------PAVFYGKLWE 516

  Fly   953 ---TDVRFREVKTNKAG-------MLTLCW---YVSGFSDVSDFHVYIRSSSNDVLHQSDYAYNN 1004
               .||.....:|:..|       ||||..   .|.|::.:..   |:|...   :.|||..|..
  Fly   517 FACADVWILNARTSSTGEKAWSIIMLTLLGLGALVLGYACLQK---YLRKRK---VRQSDREYEE 575

  Fly  1005 RTAQIPVEELSTLGEEKLR---------GAEICIVSRDSDGNTRKWFSGQCQQLPSLKRP 1055
            ...::  ..:..|.|..||         ..||.::....|          ..::|.|.||
  Fly   576 NDDEL--RRIRDLNERILREEATPSLQHTQEISLLPSYED----------ALRMPKLVRP 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733
LRR_8 198..258 CDD:404697
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
LRR 346..718 CDD:443914 96/346 (28%)
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380 5/11 (45%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
leucine-rich repeat 439..462 CDD:275380 8/26 (31%)
leucine-rich repeat 463..486 CDD:275380 8/22 (36%)
leucine-rich repeat 487..510 CDD:275380 7/26 (27%)
leucine-rich repeat 511..534 CDD:275380 7/25 (28%)
leucine-rich repeat 535..554 CDD:275380 8/30 (27%)
leucine-rich repeat 555..578 CDD:275380 5/22 (23%)
leucine-rich repeat 579..603 CDD:275380 9/28 (32%)
leucine-rich repeat 604..627 CDD:275380 4/22 (18%)
leucine-rich repeat 628..649 CDD:275380 5/20 (25%)
PPP1R42 631..849 CDD:455733 49/220 (22%)
leucine-rich repeat 652..672 CDD:275380 6/19 (32%)
leucine-rich repeat 700..726 CDD:275380 10/28 (36%)
leucine-rich repeat 727..745 CDD:275380 6/17 (35%)
leucine-rich repeat 779..802 CDD:275380 2/22 (9%)
leucine-rich repeat 829..852 CDD:275380 3/22 (14%)
CG5819NP_611660.1 RNA1 <56..193 CDD:444072 42/147 (29%)
leucine-rich repeat 56..78 CDD:275380 8/32 (25%)
leucine-rich repeat 79..102 CDD:275380 8/22 (36%)
leucine-rich repeat 103..130 CDD:275380 7/26 (27%)
leucine-rich repeat 131..155 CDD:275380 7/23 (30%)
LRR 134..>466 CDD:443914 88/389 (23%)
leucine-rich repeat 158..182 CDD:275380 6/23 (26%)
leucine-rich repeat 204..227 CDD:275380 8/22 (36%)
leucine-rich repeat 254..274 CDD:275380 6/22 (27%)
leucine-rich repeat 275..298 CDD:275380 6/22 (27%)
leucine-rich repeat 299..322 CDD:275380 7/22 (32%)
leucine-rich repeat 323..346 CDD:275380 8/22 (36%)
leucine-rich repeat 347..391 CDD:275380 12/80 (15%)
leucine-rich repeat 392..413 CDD:275380 6/24 (25%)
leucine-rich repeat 414..437 CDD:275380 3/22 (14%)
LRRCT 471..517 CDD:214507 18/69 (26%)
Blue background indicates that the domain is not in the aligned region.

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