DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and LRRTM3

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_821079.3 Gene:LRRTM3 / 347731 HGNCID:19410 Length:581 Species:Homo sapiens


Alignment Length:396 Identity:102/396 - (25%)
Similarity:170/396 - (42%) Gaps:80/396 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 LYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKL-QNNGISQPPKDA 621
            :|....:|..|||.   :....:.|.|.:|.|               |:||. |..|::|     
Human    45 VYCESQKLQEIPSS---ISAGCLGLSLRYNSL---------------QKLKYNQFKGLNQ----- 86

  Fly   622 VAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGI 686
                  |.:|:|::|:|:                        :|.:.||.|:.:|..|.||||.|
Human    87 ------LTWLYLDHNHIS------------------------NIDENAFNGIRRLKELILSSNRI 121

  Fly   687 QTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYI 751
            ....|:.|..:.:|||||||:|.|..|.::....|..||||.   |..|.:..:..:.|...:  
Human   122 SYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLH---LRSNSLRTIPVRIFQDCR-- 181

  Fly   752 PYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNL 816
              ||..|:|.||.:..|..::..|..:|..|.:.|||.:.|...:.....|||:|.:.:|::|  
Human   182 --NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKIS-- 242

  Fly   817 KSEEHIFDLPQNLSW-------LDLSHNKIYHLPFANLVK-VKSLKYVDLTNNSLEDVPASIVGS 873
                   .:.|.:||       ||||.|:|......::.: |.:|:.::|.:|.|..:...|:.|
Human   243 -------VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDS 300

  Fly   874 MRNGSQVLLAGNPLHCGCNARPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAE 938
            ..:.:.:.||||...|..|...|..::  ::..|....:|.|.:|..::...:|.....|..|.:
Human   301 WISLNDISLAGNIWECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVIDAVKNYSICGK 363

  Fly   939 DEQEMY 944
            ...|.:
Human   364 STTERF 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733
LRR_8 198..258 CDD:404697
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
LRR 346..718 CDD:443914 43/160 (27%)
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 416..438 CDD:275380
leucine-rich repeat 439..462 CDD:275380
leucine-rich repeat 463..486 CDD:275380
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..554 CDD:275380
leucine-rich repeat 555..578 CDD:275380 5/19 (26%)
leucine-rich repeat 579..603 CDD:275380 4/23 (17%)
leucine-rich repeat 604..627 CDD:275380 6/23 (26%)
leucine-rich repeat 628..649 CDD:275380 5/20 (25%)
PPP1R42 631..849 CDD:455733 64/224 (29%)
leucine-rich repeat 652..672 CDD:275380 3/19 (16%)
leucine-rich repeat 700..726 CDD:275380 12/25 (48%)
leucine-rich repeat 727..745 CDD:275380 3/17 (18%)
leucine-rich repeat 779..802 CDD:275380 6/22 (27%)
leucine-rich repeat 829..852 CDD:275380 9/30 (30%)
LRRTM3NP_821079.3 LRRNT 33..61 CDD:214470 5/18 (28%)
LRR 59..339 CDD:443914 90/347 (26%)
LRR 1 63..83 8/34 (24%)
leucine-rich repeat 66..86 CDD:275380 9/34 (26%)
LRR 2 86..107 9/55 (16%)
leucine-rich repeat 87..110 CDD:275380 9/46 (20%)
LRR 3 110..131 9/20 (45%)
leucine-rich repeat 111..134 CDD:275380 9/22 (41%)
LRR 4 134..155 10/20 (50%)
leucine-rich repeat 135..158 CDD:275380 11/22 (50%)
LRR 5 158..179 7/23 (30%)
leucine-rich repeat 159..182 CDD:275380 7/29 (24%)
LRR 6 182..203 7/20 (35%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
LRR 7 206..226 6/19 (32%)
leucine-rich repeat 207..230 CDD:275380 6/22 (27%)
LRR 8 230..251 8/29 (28%)
leucine-rich repeat 231..254 CDD:275380 8/31 (26%)
LRR 9 254..275 6/20 (30%)
leucine-rich repeat 255..279 CDD:275380 7/23 (30%)
LRR 10 279..300 5/20 (25%)
leucine-rich repeat 280..300 CDD:275380 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..408
Blue background indicates that the domain is not in the aligned region.

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