DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and CG5096

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster


Alignment Length:431 Identity:104/431 - (24%)
Similarity:173/431 - (40%) Gaps:95/431 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 TNIPSGTWPVMNSLI------YLDLS----HNQLGDTLNGESF----TGLLVVQRLKLQNNGISQ 616
            |..|.....|::|.:      |:|.:    ..:|.|.|:.|.:    .|.:|.:.:.|::|.::.
  Fly    32 TETPKEKIKVIDSKLCKKCNCYIDTNLLDCSEKLQDWLSAEDWEDLTNGNVVFKTINLEHNNLTS 96

  Fly   617 PPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQ------VKDISK-----RAF 670
            .|   :.....::.|:|.||.|.::...||..|..|..|:|..|:      |.|:.|     :.|
  Fly    97 VP---ILPKYDVENLYLANNQIDSISVGAFQNLTELVTLDLSHNRLTSKVLVPDVFKGPFTVQDF 158

  Fly   671 EGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHN 735
            |.|..|.||||..|.:.:|..|:|..:|.:..|.|..||...:|..:...:..|.||:.||:|:.
  Fly   159 ESLENLKTLNLGYNDLHSLDADLFEHIPHIEELVLCSNSFHVIDQLSETAISGLQSLKILDVSYM 223

  Fly   736 RIS---------------FVTK----KTFPSHQYIPYNLRNLNLSYNLMPILTYDITF-GTKKLV 780
            .|.               |:..    ...|.......||.:|.|:.|.:..|..|..| ...||.
  Fly   224 EIDDLPDTILHGPRDLEIFIAAGNLFNQLPKALKYATNLTSLVLNENPIENLIGDNVFPPLTKLT 288

  Fly   781 RLDVSH-NQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLS---WLD-------- 833
            .|.::. :::..:..|..|...||..|.:|.|:|.|...||   .|.:|::   :||        
  Fly   289 HLSMTFMSKLYKIGPGAFSELQSLTELILSDNKLLNEIDEE---ALSKNVTGGQYLDYPPLEKVY 350

  Fly   834 LSHNKIYHLPFANLVKVKSLKYVDLTNN-----SLEDVPASIVGSMRNGSQVLLAGNPLHCGCNA 893
            |::..:..||...||:...||.:||..|     ...|...:::....|.:..:||          
  Fly   351 LNNCNVSTLPKELLVRWDKLKALDLRFNPWNCDESNDFLINVLIDRINKTTPVLA---------- 405

  Fly   894 RPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYL 934
                             |.:.||.|..:.|..|:.:.:|::
  Fly   406 -----------------KDVKCGGPNKLNDVTLLRVANEHM 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733
LRR_8 198..258 CDD:404697
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
LRR 346..718 CDD:443914 48/176 (27%)
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 416..438 CDD:275380
leucine-rich repeat 439..462 CDD:275380
leucine-rich repeat 463..486 CDD:275380
leucine-rich repeat 487..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..554 CDD:275380
leucine-rich repeat 555..578 CDD:275380 3/11 (27%)
leucine-rich repeat 579..603 CDD:275380 7/37 (19%)
leucine-rich repeat 604..627 CDD:275380 3/22 (14%)
leucine-rich repeat 628..649 CDD:275380 7/20 (35%)
PPP1R42 631..849 CDD:455733 72/260 (28%)
leucine-rich repeat 652..672 CDD:275380 8/30 (27%)
leucine-rich repeat 700..726 CDD:275380 6/25 (24%)
leucine-rich repeat 727..745 CDD:275380 6/36 (17%)
leucine-rich repeat 779..802 CDD:275380 4/23 (17%)
leucine-rich repeat 829..852 CDD:275380 7/33 (21%)
CG5096NP_723576.1 LRR 54..>322 CDD:443914 70/270 (26%)
leucine-rich repeat 85..104 CDD:275380 3/21 (14%)
leucine-rich repeat 105..128 CDD:275380 8/22 (36%)
leucine-rich repeat 129..163 CDD:275380 10/33 (30%)
leucine-rich repeat 164..187 CDD:275380 9/22 (41%)
leucine-rich repeat 188..214 CDD:275380 6/25 (24%)
leucine-rich repeat 215..238 CDD:275380 5/22 (23%)
leucine-rich repeat 239..261 CDD:275380 2/21 (10%)
leucine-rich repeat 262..286 CDD:275380 7/23 (30%)
leucine-rich repeat 287..311 CDD:275380 4/23 (17%)
leucine-rich repeat 346..369 CDD:275380 5/22 (23%)
leucine-rich repeat 370..388 CDD:275380 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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