DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and Tlr9

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_937764.1 Gene:Tlr9 / 338457 RGDID:631352 Length:1032 Species:Rattus norvegicus


Alignment Length:1059 Identity:242/1059 - (22%)
Similarity:383/1059 - (36%) Gaps:314/1059 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 QPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHN------------QIKKLEAQHIADLTK 247
            :|...:.:|.|..|::.:|....|.:|..:..|::..|            ....:|.:....:..
  Rat    60 EPRSNITSLSLIANRIHHLHNLDFVHLPNVRQLNLKWNCPPPGLSPLHFSCRMTIEPKTFLAMRM 124

  Fly   248 LGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRG 312
            |...|:|:|.::.:.|    ..|.|..|.|||..|..|||:|..|:..||.||:..|..      
  Rat   125 LEELNLSYNGITTVPR----LPSSLTNLSLSHTNILVLDASSLAGLHSLRVLFMDGNCY------ 179

  Fly   313 TFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSHNAL 377
                                                             :|:.....:||:.:  
  Rat   180 -------------------------------------------------YKNPCNGAVNVTPD-- 193

  Fly   378 ELIETAAFENCVNITVLDLSHNRLANFSRR---SFDETTFATYFQLSYNNLTNLAQIPIQNMTGL 439
                  ||....|:|.|.|.:|.|....|:   |.:      |..||||.:..|....:.|:|.|
  Rat   194 ------AFLGLSNLTHLSLKYNNLTEVPRQLPPSLE------YLLLSYNLIVKLGPEDLANLTSL 246

  Fly   440 KVLNASYN-----SITEIPKNCFPKLYELHTIDVSH-----------NNISSIFNGVFQTLFSLR 488
            :||:...|     ...::...|..|..:||.....|           :::.|:.:..||.|.:|.
  Rat   247 RVLDVGGNCRRCDHAPDLCTECRQKSLDLHPQTFHHLSHLEGLVLKDSSLHSLNSKWFQGLVNLS 311

  Fly   489 SIDLSHNSMREI--KSSTFGTLPTLLEMDLSHN--ELVSVVR----GSLAKLTSLRQL------- 538
            .:|||.|.:.|.  |:|.|..|..|.::|||.|  :.||..|    .|...|.||::|       
  Rat   312 VLDLSENFLYESINKTSAFQNLTRLRKLDLSFNYCKKVSFARLHLASSFKSLVSLQELNMNGIFF 376

  Fly   539 -YLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLL 602
             .||.|.|..|..|| .|:.|:...|.:.......:....:|.::|||:|:    ::|......:
  Rat   377 RLLNKNTLRWLAGLP-KLHTLHLQMNFINQAQLSVFSTFRALRFVDLSNNR----ISGPPTLSRV 436

  Fly   603 VVQRLKLQNNGISQPPKDAVAVMST------------LQY-LHLENNNITTLERSAFGKLPVLFE 654
            ..::......|:..|.....|:.||            |:: :.|..||:.|::...|..|..|..
  Rat   437 APEKADEAEKGVPWPASLTPALPSTPVSKNFMVRCKNLRFTMDLSRNNLVTIKPEMFVNLSHLQC 501

  Fly   655 LNLYGNQV-KDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNS--------- 709
            |:|..|.: :.::...|..|..|..|:||.|.:....:..|..||.|:.||||:||         
  Rat   502 LSLSHNCIAQAVNGSQFLPLTNLKVLDLSYNKLDLYHSKSFSELPQLQALDLSYNSQPFSMQGIG 566

  Fly   710 --------LTKLDNKT--------------------------NGV-------------LDDLLSL 727
                    |::|.|.:                          |||             ..||.||
  Rat   567 HNFSFLANLSRLQNLSLAHNDIHSRVSSRLYSTSVEYLDFSGNGVGRMWDEEDLYLYFFQDLRSL 631

  Fly   728 ETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDL 792
            ..||||.|::..:..:..   .|:|.:|..|:...|.:....:........|..||::.|.:..|
  Rat   632 IHLDLSQNKLHILRPQNL---NYLPKSLTKLSFRDNHLSFFNWSSLAFLPNLRDLDLAGNLLKAL 693

  Fly   793 RRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVD 857
            ..|.:.|.|.||.||:|.|.:        :|.:|..               ||..|:   ||.|:
  Rat   694 TNGTLPNGTLLQKLDVSSNSI--------VFVVPAF---------------FALAVE---LKEVN 732

  Fly   858 LTNNSLEDVPASIVGSMRNGSQVL-LAGNPLHCGCNARPLKYFMLQQTIAGEDLKSIYCGTPALI 921
            |::|.|:.|..|..|.:.....|| ::.|||||.|.|..:...:..||........:.||:|..:
  Rat   733 LSHNILKTVDRSWFGPIVMNLTVLDVSSNPLHCACGAPFVDLLLEVQTKVPGLANGVKCGSPRQL 797

  Fly   922 KDKQLISLDDEYLHCAEDEQEMYKGIDYEQLTDVRFRE----------VKTNKAGMLTLC----W 972
            :.:.:.:.|...  |               |.||..|:          |.|....:..||    |
  Rat   798 QGRSIFAQDLRL--C---------------LDDVLSRDCFGLSLLAVAVGTVLPLLQHLCGWDVW 845

  Fly   973 YVSGFSDVSDFHVYI---------RSSSNDVLHQ------------SDYAYNNRTAQIPVEELST 1016
            |.        ||:.:         |.|:..:.:.            :|:.||         ||..
  Rat   846 YC--------FHLCLAWLPLLTRGRRSAQALPYDAFVVFDKAQSAVADWVYN---------ELRV 893

  Fly  1017 LGEEK--LRGAEICIVSRDSDGNTRKWFSGQC--QQL-PSL--KRPRTFFFGNFQVRGGVSRTSS 1074
            ..||:  .|...:|:..||       |..||.  :.| .|:  .|...|...:.....|:.|||.
  Rat   894 RLEERRGRRALRLCLEDRD-------WLPGQTLFENLWASIYGSRKTLFVLAHTDKVSGLLRTSF 951

  Fly  1075 SLPRCLL------YIILVL 1087
            .|.:..|      .::||:
  Rat   952 LLAQQRLLEDRKDVVVLVI 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380 1/3 (33%)
PPP1R42 191..359 CDD:455733 32/175 (18%)
LRR_8 198..258 CDD:404697 13/71 (18%)
leucine-rich repeat 200..223 CDD:275380 6/22 (27%)
leucine-rich repeat 224..271 CDD:275380 8/58 (14%)
leucine-rich repeat 272..295 CDD:275380 11/22 (50%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
leucine-rich repeat 322..343 CDD:275380 0/20 (0%)
leucine-rich repeat 344..367 CDD:275380 1/22 (5%)
LRR 346..718 CDD:443914 109/463 (24%)
leucine-rich repeat 371..390 CDD:275380 4/18 (22%)
leucine-rich repeat 391..414 CDD:275380 7/25 (28%)
leucine-rich repeat 416..438 CDD:275380 7/21 (33%)
leucine-rich repeat 439..462 CDD:275380 6/27 (22%)
leucine-rich repeat 463..486 CDD:275380 7/33 (21%)
leucine-rich repeat 487..510 CDD:275380 10/24 (42%)
leucine-rich repeat 511..534 CDD:275380 10/28 (36%)
leucine-rich repeat 535..554 CDD:275380 9/26 (35%)
leucine-rich repeat 555..578 CDD:275380 3/22 (14%)
leucine-rich repeat 579..603 CDD:275380 6/23 (26%)
leucine-rich repeat 604..627 CDD:275380 3/22 (14%)
leucine-rich repeat 628..649 CDD:275380 6/21 (29%)
PPP1R42 631..849 CDD:455733 65/274 (24%)
leucine-rich repeat 652..672 CDD:275380 5/20 (25%)
leucine-rich repeat 700..726 CDD:275380 15/81 (19%)
leucine-rich repeat 727..745 CDD:275380 6/17 (35%)
leucine-rich repeat 779..802 CDD:275380 7/22 (32%)
leucine-rich repeat 829..852 CDD:275380 3/22 (14%)
Tlr9NP_937764.1 leucine-rich repeat 43..64 CDD:275380 1/3 (33%)
LRR_8 63..135 CDD:404697 13/71 (18%)
leucine-rich repeat 65..88 CDD:275380 6/22 (27%)
leucine-rich repeat 89..124 CDD:275380 3/34 (9%)
LRR <125..>383 CDD:443914 81/330 (25%)
leucine-rich repeat 125..144 CDD:275380 5/22 (23%)
leucine-rich repeat 145..168 CDD:275380 11/22 (50%)
leucine-rich repeat 169..200 CDD:275380 10/93 (11%)
leucine-rich repeat 201..221 CDD:275380 6/19 (32%)
leucine-rich repeat 222..245 CDD:275380 7/28 (25%)
leucine-rich repeat 246..285 CDD:275380 9/38 (24%)
leucine-rich repeat 286..309 CDD:275380 4/22 (18%)
leucine-rich repeat 310..335 CDD:275380 10/24 (42%)
leucine-rich repeat 336..365 CDD:275380 10/28 (36%)
LRR 378..>714 CDD:443914 83/343 (24%)
leucine-rich repeat 393..416 CDD:275380 3/22 (14%)
leucine-rich repeat 477..498 CDD:275380 6/20 (30%)
leucine-rich repeat 499..523 CDD:275380 6/23 (26%)
leucine-rich repeat 524..547 CDD:275380 7/22 (32%)
leucine-rich repeat 548..577 CDD:275380 8/28 (29%)
leucine-rich repeat 578..630 CDD:275380 7/51 (14%)
leucine-rich repeat 601..618 CDD:275380 3/16 (19%)
leucine-rich repeat 631..655 CDD:275380 8/26 (31%)
leucine-rich repeat 656..679 CDD:275380 3/22 (14%)
leucine-rich repeat 680..703 CDD:275380 7/22 (32%)
leucine-rich repeat 704..727 CDD:275380 10/45 (22%)
leucine-rich repeat 728..746 CDD:275380 8/17 (47%)
leucine-rich repeat 753..774 CDD:275380 9/20 (45%)
SEFIR 870..1013 CDD:474043 26/117 (22%)
Blue background indicates that the domain is not in the aligned region.

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