DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and CG42346

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster


Alignment Length:1183 Identity:273/1183 - (23%)
Similarity:465/1183 - (39%) Gaps:321/1183 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GEPEFKCPKKSKALYPCECVKGSDNGLYIRCENTNLATLSVALQNLASFGMPIEELTIYRGHFVR 89
            |....:||.....  .|.|.|..| ||::.|..|...:|...|:.:::   ||..|:||  .|.|
  Fly   230 GAAGIECPSFDNT--ACPCYKFED-GLFLECPGTTAISLRSTLERISA---PIHSLSIY--DFDR 286

  Fly    90 ----LYGPLF---AHIKARMLIIEETPLATIEDYVFYGVNNTLEQLHLLRTNLSHVGLLGFGILG 147
                |...:|   .||  |.|....:.|..::|.....|.::||.|.::...|:.:.......:.
  Fly   287 SVTSLSQDVFQPGVHI--RHLQFSHSHLEALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQ 349

  Fly   148 KAKELVID-----------------------GHAFQQLPKDLFAG-----QEI------------ 172
            |...|..|                       |:..|.:|:..|||     |||            
  Fly   350 KLTALDFDYNEIVRVDDYSFYGLRISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPL 414

  Fly   173 -----ANSLGIIRVTNGNL----SDLPIET----------------------------------- 193
                 .:.|.|:|::|..:    .|:.:.|                                   
  Fly   415 MALRKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDC 479

  Fly   194 FQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQI-----------KKLEA-----QHI 242
            |:...:||||..:.||:|.::...||:||||..||:|||:|           |:|:.     .||
  Fly   480 FRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHI 544

  Fly   243 -------ADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLF 300
                   ::|.:|....:|.|.:.||....|..::.:.|::|..|.||.:|.|.|..:..|..|:
  Fly   545 HTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLY 609

  Fly   301 LSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITK--------- 356
            |..|.:..:....|....::.::.|..|.::.:|..||.::.::..:.|..|.|.:         
  Fly   610 LRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPL 674

  Fly   357 -------IEKNSFKDI----YQAIINVSH-----------------------------NALELIE 381
                   |:|||.:||    :..:.|:.|                             |.|..:.
  Fly   675 PSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVH 739

  Fly   382 TAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASY 446
            ...|.....:.::.|..|:|....|..|.:|.......||.|.:.::.:....|:..|:.|:.|.
  Fly   740 PRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSG 804

  Fly   447 NSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHN---------------- 495
            |.:.::.::.|..|.:|..:.::.|:|.:|....|..|.:|:|:|||||                
  Fly   805 NQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPL 869

  Fly   496 --------SMREIKSSTFGTLPTLLEMDLSHNEL----------------------------VSV 524
                    |:|:::...|.:|..|.|::|..|:|                            |.:
  Fly   870 NSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNNFSYAGSVGI 934

  Fly   525 VRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQL 589
            :.|.|.:|.||:||.::|..|.   |:|    :|.|:.|  ||           |:.|||..|:|
  Fly   935 MAGMLDRLRSLQQLSMSNCSLG---QIP----DLLFAKN--TN-----------LVRLDLCDNRL 979

  Fly   590 GDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLP---V 651
             ..:|...|:||.|.:.|:|..|.:|..|..|:..:|||:.|.|..|.:.:::   |.||.   .
  Fly   980 -TQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASID---FFKLSGTLN 1040

  Fly   652 LFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQT----------------LQNDIFVGLPSL 700
            |.:|.|..|::..:|......|.||.:::||.|.:.:                |.|:.|:.:||.
  Fly  1041 LRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSS 1105

  Fly   701 RNLDLSFNSLTKLDNKTNGVLDDLLS--------LETLDLSHNRISFVTKKTFPSHQYIPY---- 753
            ...|:|...|:.| |.|...::.:.:        |:.|.:....:|.:|.|.|.:.|.:.:    
  Fly  1106 ALSDVSIPRLSWL-NLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLV 1169

  Fly   754 ----------------NLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTS 802
                            ||..|:||.|.:.:|..:...|.:.|..|::|||.:.||....: :...
  Fly  1170 NNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSV-DLLE 1233

  Fly   803 LQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVP 867
            :|:||:|:|:|..:..:  .|.....|..|.|..|::..|.......::.|..:||..|..|.||
  Fly  1234 MQTLDLSFNQLDRISKK--TFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVP 1296

  Fly   868 ASIVGSMRNGSQVL-LAGNPLHCGCNARPLKYFM--------------------LQQTIAGEDLK 911
            ...:..:....:.| |..|||||.|:|:.|..::                    |...:.|:.:.
  Fly  1297 LEPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRDHRKWSLSMGSGAGRGIGGLTGGLGGDSIN 1361

  Fly   912 SIYCGTPALIKDK 924
            .:.|..|..::.|
  Fly  1362 YLRCEHPTELRGK 1374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 4/22 (18%)
leucine-rich repeat 150..175 CDD:275380 11/69 (16%)
leucine-rich repeat 176..199 CDD:275380 7/61 (11%)
LRR_8 198..258 CDD:290566 27/82 (33%)
leucine-rich repeat 200..223 CDD:275380 10/22 (45%)
LRR_RI 201..545 CDD:238064 108/467 (23%)
leucine-rich repeat 224..271 CDD:275380 18/69 (26%)
LRR_8 245..306 CDD:290566 19/60 (32%)
leucine-rich repeat 272..295 CDD:275380 8/22 (36%)
LRR_8 296..354 CDD:290566 12/57 (21%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 322..401 CDD:290566 21/127 (17%)
leucine-rich repeat 322..343 CDD:275380 5/20 (25%)
leucine-rich repeat 344..367 CDD:275380 9/42 (21%)
leucine-rich repeat 371..390 CDD:275380 5/47 (11%)
leucine-rich repeat 391..414 CDD:275380 6/22 (27%)
leucine-rich repeat 416..438 CDD:275380 4/21 (19%)
LRR_8 437..495 CDD:290566 17/57 (30%)
leucine-rich repeat 439..462 CDD:275380 6/22 (27%)
leucine-rich repeat 463..486 CDD:275380 6/22 (27%)
LRR_RI 486..738 CDD:238064 83/330 (25%)
LRR_8 486..545 CDD:290566 25/110 (23%)
leucine-rich repeat 487..510 CDD:275380 11/46 (24%)
leucine-rich repeat 511..534 CDD:275380 9/50 (18%)
leucine-rich repeat 535..554 CDD:275380 7/18 (39%)
LRR_8 554..614 CDD:290566 19/59 (32%)
leucine-rich repeat 555..578 CDD:275380 5/22 (23%)
leucine-rich repeat 579..603 CDD:275380 10/23 (43%)
leucine-rich repeat 604..627 CDD:275380 6/22 (27%)
LRR_8 626..710 CDD:290566 27/102 (26%)
leucine-rich repeat 628..649 CDD:275380 5/20 (25%)
leucine-rich repeat 652..672 CDD:275380 5/19 (26%)
LRR_8 698..765 CDD:290566 21/94 (22%)
leucine-rich repeat 700..726 CDD:275380 6/25 (24%)
leucine-rich repeat 727..745 CDD:275380 5/17 (29%)
LRR_8 777..839 CDD:290566 18/61 (30%)
leucine-rich repeat 779..802 CDD:275380 7/22 (32%)
leucine-rich repeat 829..852 CDD:275380 5/22 (23%)
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380 5/21 (24%)
LRR_8 325..384 CDD:290566 8/58 (14%)
leucine-rich repeat 327..350 CDD:275380 4/22 (18%)
leucine-rich repeat 351..461 CDD:275380 17/109 (16%)
LRR_8 373..433 CDD:290566 13/59 (22%)
LRR_RI 397..648 CDD:238064 57/250 (23%)
leucine-rich repeat 399..422 CDD:275380 3/22 (14%)
leucine-rich repeat 462..485 CDD:275380 1/22 (5%)
LRR_8 465..520 CDD:290566 19/54 (35%)
leucine-rich repeat 486..509 CDD:275380 10/22 (45%)
LRR_8 508..567 CDD:290566 17/58 (29%)
leucine-rich repeat 510..533 CDD:275380 7/22 (32%)
LRR_RI 527..785 CDD:238064 52/257 (20%)
leucine-rich repeat 534..556 CDD:275380 4/21 (19%)
LRR_8 555..613 CDD:290566 17/57 (30%)
leucine-rich repeat 557..580 CDD:275380 6/22 (27%)
leucine-rich repeat 581..604 CDD:275380 8/22 (36%)
LRR_8 604..663 CDD:290566 12/58 (21%)
leucine-rich repeat 605..628 CDD:275380 5/22 (23%)
leucine-rich repeat 629..652 CDD:275380 5/22 (23%)
LRR_8 652..711 CDD:290566 11/58 (19%)
leucine-rich repeat 653..676 CDD:275380 3/22 (14%)
leucine-rich repeat 677..700 CDD:275380 6/22 (27%)
leucine-rich repeat 701..748 CDD:275380 4/46 (9%)
leucine-rich repeat 725..736 CDD:275378 1/10 (10%)
leucine-rich repeat 749..772 CDD:275380 6/22 (27%)
LRR_8 771..831 CDD:290566 12/59 (20%)
leucine-rich repeat 773..793 CDD:275380 3/19 (16%)
LRR_RI 804..1076 CDD:238064 79/295 (27%)
LRR_8 821..903 CDD:290566 21/81 (26%)
leucine-rich repeat 821..844 CDD:275380 6/22 (27%)
leucine-rich repeat 845..868 CDD:275380 7/22 (32%)
leucine-rich repeat 869..892 CDD:275380 4/22 (18%)
leucine-rich repeat 893..915 CDD:275380 5/21 (24%)
leucine-rich repeat 916..944 CDD:275380 4/27 (15%)
leucine-rich repeat 945..968 CDD:275380 10/31 (32%)
LRR_8 967..1027 CDD:290566 25/71 (35%)
leucine-rich repeat 969..992 CDD:275380 10/23 (43%)
leucine-rich repeat 993..1014 CDD:275380 6/20 (30%)
LRR_8 1015..1075 CDD:290566 20/62 (32%)
leucine-rich repeat 1017..1040 CDD:275380 7/25 (28%)
leucine-rich repeat 1041..1064 CDD:275380 6/22 (27%)
LRR_RI <1047..1244 CDD:238064 46/198 (23%)
LRR_8 1063..1125 CDD:290566 16/62 (26%)
leucine-rich repeat 1089..1114 CDD:275380 7/24 (29%)
leucine-rich repeat 1115..1162 CDD:275380 10/47 (21%)
LRR_8 1163..1219 CDD:290566 11/55 (20%)
leucine-rich repeat 1163..1186 CDD:275380 0/22 (0%)
leucine-rich repeat 1187..1210 CDD:275380 7/22 (32%)
leucine-rich repeat 1211..1233 CDD:275380 7/22 (32%)
leucine-rich repeat 1234..1257 CDD:275380 7/24 (29%)
LRR_8 1235..1292 CDD:290566 16/58 (28%)
leucine-rich repeat 1258..1279 CDD:275380 5/20 (25%)
leucine-rich repeat 1282..1306 CDD:275380 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42484
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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