DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and Tlr7

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_017457568.1 Gene:Tlr7 / 317468 RGDID:1563357 Length:1068 Species:Rattus norvegicus


Alignment Length:1050 Identity:247/1050 - (23%)
Similarity:433/1050 - (41%) Gaps:246/1050 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 TLEQLHLLRTNLSHVG-LLGFGILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVTNGNLS 187
            ||::...:..|:..|. :|||....|.            ||.|:  ..:..|:..|:..|:.:|:
  Rat    25 TLKRQSFIFLNMILVSRVLGFRWYPKT------------LPCDV--SLDSTNTHVIVDCTDKHLT 75

  Fly   188 DLP--IETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLG- 249
            ::|  |.|     ....|.|..|.:.::..:.|..|:.||.||:..|.:..|          || 
  Rat    76 EIPEGIPT-----NTTNLTLTINHIPSISPDSFHRLKHLEELDLRCNCVPIL----------LGS 125

  Fly   250 WCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARL--DANSFRGMRFLRRLFLSDNVLTDIGRG 312
            ..||....| ::..|:|:..|.||.|:|..||:..:  |..|     .|:.|.|..|.:..|.:.
  Rat   126 KANVCTKRL-QIRPGSFSGLSDLKSLYLDGNQLLEIPQDLPS-----SLQLLSLEANNIFSITKE 184

  Fly   313 TFGSIARIGTIDLARNRLKK--------IEFQMFTQMNYVELLDLAENNITKIE---KNSFKDIY 366
            ....:..|.::.|.:|...:        ||...|..|..:::|.|.:||:|.:.   ..:..::|
  Rat   185 NLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVMKNLKVLSLKDNNVTAVPTILPPNLLELY 249

  Fly   367 QAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQI 431
                 :.:|.::.|:...|.....:.|||||.|     ..|.::.....|               
  Rat   250 -----LYNNIIKRIQEHDFNKLSQLQVLDLSGN-----CPRCYNVPYPCT--------------- 289

  Fly   432 PIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNS 496
            |.:|.:.|::.:.:::|:||:      |:..||:     |::..:....|:.:.:|:.:|||.|.
  Rat   290 PCENNSPLQIHDNAFDSLTEL------KVLRLHS-----NSLQHVPAEWFKNMSNLQELDLSQNY 343

  Fly   497 M-REIKSSTF-GTLPTLLEMDLSHNELVSVVRG------SLAKLTSLRQLYLNNNQLEKLFQLPI 553
            : |||:.:.| .:||.|:::|||.|..:.|...      ||:.||.|:.||:.....::|....:
  Rat   344 LAREIEEAKFLNSLPNLVQLDLSFNYELQVYHASITLPHSLSSLTKLKNLYIKGYVFKELKDSSL 408

  Fly   554 SLNELYFSHNRLTN---IPSGT----------WPVMNSLIYLDLSHN---------QLGDTLNGE 596
            |:     .|| |:|   :..||          :....:|.::|||.|         ::|...|.:
  Rat   409 SV-----LHN-LSNLEVLDLGTNFIKIADLNIFQQFENLKFIDLSVNKISPSEESREVGLCPNAQ 467

  Fly   597 S---FTGLLVVQRL------------KLQNNGISQPP------KDAVAVMSTLQYLHLENNNITT 640
            :   :.|..|::.|            :.:|   .:||      .|......||.   |..|||..
  Rat   468 TSVDWHGPQVLEALHYFRYDEYARSCRFKN---KEPPTFLPLNADCHTYGKTLD---LSRNNIFF 526

  Fly   641 LERSAFGKLPVLFELNLYGNQV-KDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLD 704
            ::.|.|..|..|..|||.||.: :.::....:.|.:|..|:.|:|.:..|.:..|..|.:|..||
  Rat   527 IKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILD 591

  Fly   705 LSFNS-------LTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSY 762
            ||.||       :|.:.|.|.    .|..||.|.::.|.||....:|..|.     :||.|....
  Rat   592 LSSNSHYFQAEGITHMLNFTK----KLRHLEKLMMNDNDISTSASRTMESE-----SLRVLEFRG 647

  Fly   763 NLMPILTYD-----ITF--GTKKLVRLDVSHNQINDLRRGVIS----NFTS-------------- 802
            |.:.:|..|     :.|  ....|..||:|.|.:|.:..||..    |.|:              
  Rat   648 NHLDVLWRDGDNRYLDFFKNLLNLEELDISRNSLNSVPPGVFEGMPPNLTTLSLAKNGLRSFSWG 712

  Fly   803 -------LQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTN 860
                   |::||:|:|:|:.:.:  .:.:..::|:.|.|:||:|..|....|.....|:|:|:::
  Rat   713 RLQLLKHLKNLDLSHNQLTTVPA--RLANCSKSLTKLILNHNQIRQLTKYFLEDALQLRYLDISS 775

  Fly   861 NSLEDV-----PASIVGSMRNGSQVLLAGNPLHCGCNARPLKYFMLQQTIAGEDLKS-IYCGTPA 919
            |.::.:     |.::   :.|.:.:||..|...|.|:|....:::....:....|.: :.|..|.
  Rat   776 NKIQVIQKTSFPENV---LNNLNMLLLHHNRFLCNCDAVWFVWWVNHTDVTIPYLATDVTCAGPG 837

  Fly   920 LIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQLTDVRFREVKTNKAGMLTL-----------CWY 973
            ..|.:.:||||   |:..|        :|   ||::....|..:....|.:           .||
  Rat   838 AHKGQSVISLD---LYTCE--------LD---LTNLILFSVSISSVLFLMIVMTTSHLFFWDMWY 888

  Fly   974 VSGF--SDVSDF-HVYIRSSSNDVLHQSDYAYNNRTAQIPVEELSTLGEEKLRGAEICIVSRDSD 1035
            :..|  :.:..: |:....|..|.....|...:..|..:..|.:..|.:.:.:...:|:..||  
  Rat   889 IYYFWKAKIKGYQHLQSMESCYDAFIVYDTKNSAVTEWVLQELVVKLEDPREKHFNLCLEERD-- 951

  Fly  1036 GNTRKWFSGQ 1045
                 |..||
  Rat   952 -----WLPGQ 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 6/23 (26%)
leucine-rich repeat 150..175 CDD:275380 3/24 (13%)
leucine-rich repeat 176..199 CDD:275380 6/24 (25%)
LRR_8 198..258 CDD:290566 15/60 (25%)
leucine-rich repeat 200..223 CDD:275380 5/22 (23%)
LRR_RI 201..545 CDD:238064 91/365 (25%)
leucine-rich repeat 224..271 CDD:275380 13/47 (28%)
LRR_8 245..306 CDD:290566 20/63 (32%)
leucine-rich repeat 272..295 CDD:275380 8/24 (33%)
LRR_8 296..354 CDD:290566 15/65 (23%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 322..401 CDD:290566 21/89 (24%)
leucine-rich repeat 322..343 CDD:275380 6/28 (21%)
leucine-rich repeat 344..367 CDD:275380 5/25 (20%)
leucine-rich repeat 371..390 CDD:275380 3/18 (17%)
leucine-rich repeat 391..414 CDD:275380 7/22 (32%)
leucine-rich repeat 416..438 CDD:275380 3/21 (14%)
LRR_8 437..495 CDD:290566 13/57 (23%)
leucine-rich repeat 439..462 CDD:275380 5/22 (23%)
leucine-rich repeat 463..486 CDD:275380 4/22 (18%)
LRR_RI 486..738 CDD:238064 84/310 (27%)
LRR_8 486..545 CDD:290566 24/66 (36%)
leucine-rich repeat 487..510 CDD:275380 10/24 (42%)
leucine-rich repeat 511..534 CDD:275380 9/28 (32%)
leucine-rich repeat 535..554 CDD:275380 4/18 (22%)
LRR_8 554..614 CDD:290566 18/96 (19%)
leucine-rich repeat 555..578 CDD:275380 6/35 (17%)
leucine-rich repeat 579..603 CDD:275380 8/35 (23%)
leucine-rich repeat 604..627 CDD:275380 5/40 (13%)
LRR_8 626..710 CDD:290566 30/91 (33%)
leucine-rich repeat 628..649 CDD:275380 7/20 (35%)
leucine-rich repeat 652..672 CDD:275380 6/20 (30%)
LRR_8 698..765 CDD:290566 23/73 (32%)
leucine-rich repeat 700..726 CDD:275380 11/32 (34%)
leucine-rich repeat 727..745 CDD:275380 6/17 (35%)
LRR_8 777..839 CDD:290566 21/86 (24%)
leucine-rich repeat 779..802 CDD:275380 9/26 (35%)
leucine-rich repeat 829..852 CDD:275380 8/22 (36%)
Tlr7XP_017457568.1 leucine-rich repeat 66..87 CDD:275380 6/25 (24%)
LRR_8 93..157 CDD:290566 22/74 (30%)
leucine-rich repeat 109..146 CDD:275380 13/47 (28%)
leucine-rich repeat 147..191 CDD:275380 13/48 (27%)
leucine-rich repeat 192..223 CDD:275380 7/30 (23%)
LRR_8 222..277 CDD:290566 14/59 (24%)
LRR_RI 223..472 CDD:238064 67/290 (23%)
leucine-rich repeat 224..244 CDD:275380 5/19 (26%)
leucine-rich repeat 245..268 CDD:275380 4/27 (15%)
leucine-rich repeat 269..309 CDD:275380 12/59 (20%)
LRR_8 308..368 CDD:290566 22/70 (31%)
leucine-rich repeat 310..333 CDD:275380 5/33 (15%)
leucine-rich repeat 334..359 CDD:275380 10/24 (42%)
leucine-rich repeat 370..389 CDD:275380 4/18 (22%)
leucine-rich repeat 390..416 CDD:275380 8/31 (26%)
leucine-rich repeat 417..440 CDD:275380 2/22 (9%)
LRR_8 515..573 CDD:290566 20/60 (33%)
leucine-rich repeat 515..537 CDD:275380 9/24 (38%)
LRR_RI 532..778 CDD:238064 70/256 (27%)
leucine-rich repeat 538..562 CDD:275380 7/23 (30%)
LRR_8 561..627 CDD:290566 22/69 (32%)
leucine-rich repeat 563..586 CDD:275380 7/22 (32%)
leucine-rich repeat 587..616 CDD:275380 11/32 (34%)
leucine-rich repeat 617..639 CDD:275380 8/26 (31%)
LRR_8 639..706 CDD:290566 17/66 (26%)
leucine-rich repeat 640..670 CDD:275380 7/29 (24%)
leucine-rich repeat 671..695 CDD:275380 8/23 (35%)
LRR_8 694..754 CDD:290566 13/61 (21%)
leucine-rich repeat 696..719 CDD:275380 1/22 (5%)
leucine-rich repeat 720..743 CDD:275380 6/24 (25%)
leucine-rich repeat 768..786 CDD:275380 4/17 (24%)
TIR 909..1054 CDD:214587 10/54 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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