DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and Tlr2

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_008759324.3 Gene:Tlr2 / 310553 RGDID:735138 Length:831 Species:Rattus norvegicus


Alignment Length:821 Identity:180/821 - (21%)
Similarity:319/821 - (38%) Gaps:212/821 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 GWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGT 313
            |.|:.|..:.:.:..|                    |.||:       ::|.||.|.:|.||.|.
  Rat    81 GVCDGSSRSFTSIPSG--------------------LTANT-------KKLDLSFNKITYIGHGD 118

  Fly   314 FGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQ-AIINVSHNAL 377
            ..:...:..:.|..:.:..||...|..:..:|.|||:.|:::.:..:.|:.:.. ..:|:..|..
  Rat   119 LRACVNLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNPY 183

  Fly   378 ELI-ETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKV 441
            ..: ||:.|.|..|     |.:.|:.|..       ||:...::.:..||:|.::.||.::....
  Rat   184 RTLGETSLFSNLTN-----LQNLRVGNVD-------TFSEIRRIDFAGLTSLNELEIQVLSLGNY 236

  Fly   442 LNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVF-QTLFSLRSIDLSHNSMREIKSSTF 505
            .:.|..||.:|        |.| |:.:|.   |:...|:| ..|.|:|.::|...::...:.|  
  Rat   237 ESRSLQSIRDI--------YHL-TLHLSE---SAFLLGIFADILSSVRYLELRDTNLARFQFS-- 287

  Fly   506 GTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNN---NQLEKLFQLPISLNELYFSHNRLTN 567
                     :||.:|:     .|..|..:.|...|.:   |:|.||.:..:.|.|:.|.|..|..
  Rat   288 ---------ELSVDEI-----NSPMKKLAFRNADLTDKSFNELLKLLRYILELMEVEFDHCTLNG 338

  Fly   568 IPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLH 632
            :  |.:....|.:..:|..                 |:.:.:::..|  |.......:||: |..
  Rat   339 V--GNFNPSESDVVRELGK-----------------VETVTIRSLHI--PQFYLFYDLSTV-YSL 381

  Fly   633 LENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGL 697
            ||.....|:|.|....:|..|..:|...:..|:|:..   :::....|.:..|          |.
  Rat   382 LEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENL---MVEEYLKNSACEG----------GW 433

  Fly   698 PSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSY 762
            |||::|.||.|.|..: .||..:|..|.:|..||:|.|  ||   :..|.....|..:|.|||| 
  Rat   434 PSLQSLVLSQNHLRSI-RKTAEILLTLKNLTALDISKN--SF---QPMPDSCQWPGKMRFLNLS- 491

  Fly   763 NLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFT----SLQSLDMSYNELSNLKSEEHIF 823
                                          ..|:.:..|    :|:.||:|.|.|.:..    :|
  Rat   492 ------------------------------STGIQAVKTCIPQTLEVLDVSNNNLDSFS----LF 522

  Fly   824 DLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLH 888
             ||: |..|.:|.||:..||.|:|..|  |:.:.:..|::.......:||......:....|...
  Rat   523 -LPR-LQELYISRNKLKTLPEASLFPV--LQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHFI 583

  Fly   889 CGCNARPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQLT 953
            |.|.   |..|:|::              |||:  ..|:...|.|| |  |......|   ::|.
  Rat   584 CSCE---LLSFILER--------------PALV--HVLVDWPDSYL-C--DSPPRLHG---QRLQ 623

  Fly   954 DVRFREVKTNKAGMLT---------------LCWYVSGFSDVSDFHVYIRSS-------SNDVLH 996
            |.|...::.::|.:::               ||::..|...:.....::|:.       ..|:.:
  Rat   624 DARPSVLECHQAALVSGVCCALLLLILLLGALCYHFHGLWYLRMMWAWLRAKRKPKKAPCRDLCY 688

  Fly   997 QSDYAYNNRTAQIPVEELSTLGEEKLRGAE----ICIVSRD 1033
            .:..:|:.:.:.. ||.|..   ::|..::    :|:..||
  Rat   689 DAFVSYSEQDSYW-VENLMV---QQLENSDPPFKLCLHKRD 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733 24/109 (22%)
LRR_8 198..258 CDD:404697 3/8 (38%)
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380 4/21 (19%)
leucine-rich repeat 272..295 CDD:275380 3/22 (14%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
leucine-rich repeat 322..343 CDD:275380 4/20 (20%)
leucine-rich repeat 344..367 CDD:275380 6/22 (27%)
LRR 346..718 CDD:443914 85/377 (23%)
leucine-rich repeat 371..390 CDD:275380 6/19 (32%)
leucine-rich repeat 391..414 CDD:275380 3/22 (14%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 7/23 (30%)
leucine-rich repeat 487..510 CDD:275380 3/22 (14%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..554 CDD:275380 6/21 (29%)
leucine-rich repeat 555..578 CDD:275380 6/22 (27%)
leucine-rich repeat 579..603 CDD:275380 1/23 (4%)
leucine-rich repeat 604..627 CDD:275380 3/22 (14%)
leucine-rich repeat 628..649 CDD:275380 6/20 (30%)
PPP1R42 631..849 CDD:455733 59/221 (27%)
leucine-rich repeat 652..672 CDD:275380 4/19 (21%)
leucine-rich repeat 700..726 CDD:275380 10/25 (40%)
leucine-rich repeat 727..745 CDD:275380 7/17 (41%)
leucine-rich repeat 779..802 CDD:275380 2/26 (8%)
leucine-rich repeat 829..852 CDD:275380 10/22 (45%)
Tlr2XP_008759324.3 LRR <86..337 CDD:443914 71/317 (22%)
leucine-rich repeat 101..124 CDD:275378 8/29 (28%)
leucine-rich repeat 125..148 CDD:275378 4/22 (18%)
leucine-rich repeat 149..172 CDD:275378 6/22 (27%)
leucine-rich repeat 173..197 CDD:275378 6/23 (26%)
leucine-rich repeat 229..249 CDD:275380 5/27 (19%)
leucine-rich repeat 250..270 CDD:275380 7/23 (30%)
LRR <382..>598 CDD:443914 71/290 (24%)
leucine-rich repeat 409..435 CDD:275380 5/38 (13%)
leucine-rich repeat 436..461 CDD:275380 10/25 (40%)
leucine-rich repeat 462..484 CDD:275380 9/26 (35%)
leucine-rich repeat 485..505 CDD:275380 7/50 (14%)
leucine-rich repeat 506..525 CDD:275380 8/23 (35%)
leucine-rich repeat 526..547 CDD:275380 9/20 (45%)
leucine-rich repeat 548..571 CDD:275380 4/22 (18%)
LRRCT 580..633 CDD:214507 19/77 (25%)
TIR 687..831 CDD:214587 8/43 (19%)
Blue background indicates that the domain is not in the aligned region.

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