Sequence 1: | NP_001286416.1 | Gene: | conv / 36588 | FlyBaseID: | FBgn0261269 | Length: | 1092 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062051.2 | Gene: | Tlr4 / 29260 | RGDID: | 3870 | Length: | 835 | Species: | Rattus norvegicus |
Alignment Length: | 746 | Identity: | 189/746 - (25%) |
---|---|---|---|
Similarity: | 302/746 - (40%) | Gaps: | 216/746 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 185 NLS----DLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADL 245
Fly 246 TKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIG 310
Fly 311 RGTFGSIARIGTIDLARNRLKKIEF-QMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSH 374
Fly 375 NALELIETAAFEN-CVNITVLDLSHNRLANFSRRSFD-----ETTFATYFQLSYNNLTNLAQIPI 433
Fly 434 QNMTGLKV-------------LNASYNSITE----IPKNCFPKLYELHTIDVSHN-----NISSI 476
Fly 477 -FNGV-------------FQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHN-ELVSVVR 526
Fly 527 GSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGD 591
Fly 592 TLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTL-ERSAFGKLPVLFEL 655
Fly 656 NLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQ--TLQNDIFVGLPSLRNLDLSFNSLTKLDNKTN 718
Fly 719 GVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLD 783
Fly 784 VSHNQINDLRRGVISNF-TSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANL 847
Fly 848 VKVKSLKYVDLTNNSLEDVPASIVGSMRNGS 878 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
conv | NP_001286416.1 | leucine-rich repeat | 125..148 | CDD:275380 | |
leucine-rich repeat | 150..175 | CDD:275380 | |||
leucine-rich repeat | 176..199 | CDD:275380 | 6/17 (35%) | ||
LRR_8 | 198..258 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | 201..545 | CDD:238064 | 100/387 (26%) | ||
leucine-rich repeat | 224..271 | CDD:275380 | 10/46 (22%) | ||
LRR_8 | 245..306 | CDD:290566 | 13/60 (22%) | ||
leucine-rich repeat | 272..295 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 296..354 | CDD:290566 | 11/58 (19%) | ||
leucine-rich repeat | 296..319 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 322..401 | CDD:290566 | 22/80 (28%) | ||
leucine-rich repeat | 322..343 | CDD:275380 | 3/21 (14%) | ||
leucine-rich repeat | 344..367 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 371..390 | CDD:275380 | 3/19 (16%) | ||
leucine-rich repeat | 391..414 | CDD:275380 | 7/27 (26%) | ||
leucine-rich repeat | 416..438 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 437..495 | CDD:290566 | 21/93 (23%) | ||
leucine-rich repeat | 439..462 | CDD:275380 | 6/39 (15%) | ||
leucine-rich repeat | 463..486 | CDD:275380 | 11/41 (27%) | ||
LRR_RI | 486..738 | CDD:238064 | 72/255 (28%) | ||
LRR_8 | 486..545 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 535..554 | CDD:275380 | 6/18 (33%) | ||
LRR_8 | 554..614 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 555..578 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 579..603 | CDD:275380 | 12/23 (52%) | ||
leucine-rich repeat | 604..627 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 626..710 | CDD:290566 | 25/86 (29%) | ||
leucine-rich repeat | 628..649 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 652..672 | CDD:275380 | 4/19 (21%) | ||
LRR_8 | 698..765 | CDD:290566 | 25/66 (38%) | ||
leucine-rich repeat | 700..726 | CDD:275380 | 10/25 (40%) | ||
leucine-rich repeat | 727..745 | CDD:275380 | 6/17 (35%) | ||
LRR_8 | 777..839 | CDD:290566 | 9/62 (15%) | ||
leucine-rich repeat | 779..802 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 829..852 | CDD:275380 | 6/22 (27%) | ||
Tlr4 | NP_062051.2 | PLN00113 | 23..>456 | CDD:215061 | 132/524 (25%) |
LRR 1 | 54..75 | 9/27 (33%) | |||
leucine-rich repeat | 58..78 | CDD:275380 | 8/19 (42%) | ||
LRR 2 | 78..99 | 7/33 (21%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 8/35 (23%) | ||
LRR 3 | 102..123 | 8/31 (26%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 9/33 (27%) | ||
LRR 4 | 126..147 | 3/20 (15%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 4/22 (18%) | ||
LRR 5 | 150..171 | 2/20 (10%) | |||
leucine-rich repeat | 151..175 | CDD:275380 | 3/23 (13%) | ||
LRR 6 | 175..198 | 10/37 (27%) | |||
leucine-rich repeat | 176..204 | CDD:275380 | 12/46 (26%) | ||
LRR 7 | 204..224 | 7/20 (35%) | |||
leucine-rich repeat | 205..226 | CDD:275380 | 6/21 (29%) | ||
LRR 8 | 226..247 | 5/25 (20%) | |||
leucine-rich repeat | 256..310 | CDD:275380 | 10/53 (19%) | ||
LRR 9 | 372..381 | 5/8 (63%) | |||
leucine-rich repeat | 373..398 | CDD:275380 | 9/42 (21%) | ||
LRR 10 | 398..420 | 12/47 (26%) | |||
leucine-rich repeat | 399..421 | CDD:275380 | 12/47 (26%) | ||
LRR 11 | 421..442 | 5/20 (25%) | |||
leucine-rich repeat | 422..446 | CDD:275380 | 7/23 (30%) | ||
LRR 12 | 446..467 | 4/20 (20%) | |||
leucine-rich repeat | 447..470 | CDD:275380 | 6/22 (27%) | ||
LRR 13 | 470..491 | 7/21 (33%) | |||
leucine-rich repeat | 471..495 | CDD:275380 | 8/24 (33%) | ||
LRR_8 | 494..554 | CDD:404697 | 25/83 (30%) | ||
LRR 14 | 495..516 | 8/23 (35%) | |||
leucine-rich repeat | 496..519 | CDD:275380 | 10/25 (40%) | ||
LRR 15 | 519..540 | 9/24 (38%) | |||
leucine-rich repeat | 520..543 | CDD:275380 | 9/26 (35%) | ||
LRR 16 | 543..564 | 8/45 (18%) | |||
leucine-rich repeat | 544..567 | CDD:275380 | 9/47 (19%) | ||
TIR | 672..813 | CDD:214587 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |