DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and Nrros

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_666181.3 Gene:Nrros / 224109 MGIID:2445095 Length:693 Species:Mus musculus


Alignment Length:834 Identity:189/834 - (22%)
Similarity:286/834 - (34%) Gaps:322/834 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 LSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFK---NLRELEVLD--ISHNQIKKLEAQHIADL 245
            |.||...:.|...:|:.|.||...|:.:....|:   :||.|.:.|  :|.|..:...|.|    
Mouse    69 LKDLWNHSLQAYPRLENLSLHSCHLDRISHYAFREQGHLRNLVLADNRLSENYKESAAALH---- 129

  Fly   246 TKLGW--CNVSHNALSELSRGTFARN-SVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLT 307
            |.||.  .::|.|:|:|.......:| |.|:|:.|:.|.:.|||.:.|.|:..|..|.|..|.:.
Mouse   130 TLLGLRRLDLSGNSLTEDMAALMLQNLSSLEVVSLARNTLMRLDDSIFEGLEHLVELDLQRNYIF 194

  Fly   308 DIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINV 372
            :|..|.|..:..:..::||.|.|..|.....||:.:                          :||
Mouse   195 EIEGGAFDGLTELRRLNLAYNNLPCIVDFSLTQLRF--------------------------LNV 233

  Fly   373 SHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMT 437
            |:|.||....|..|....:.:||||||:|..|                           |:    
Mouse   234 SYNILEWFLAAREEVAFELEILDLSHNQLLFF---------------------------PL---- 267

  Fly   438 GLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRS----------ID- 491
                               .|:..:|||:.:..||:     |.::.|::..|          :| 
Mouse   268 -------------------LPQCGKLHTLLLQDNNM-----GFYRELYNTSSPQEMVAQFLLVDG 308

  Fly   492 -----LSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQL 551
                 .:.|...|..||   .|..|..:|:|.|:...:..|.|.|..||..|.||.|.|:.|   
Mouse   309 NVTNITTVNLWEEFSSS---DLSALRFLDMSQNQFRHLPDGFLKKTPSLSHLNLNQNCLKML--- 367

  Fly   552 PISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQ 616
                      |.| .:.|.|      :|..||||||||.:.......||                
Mouse   368 ----------HIR-EHEPPG------ALTELDLSHNQLAELHLAPGLTG---------------- 399

  Fly   617 PPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNL 681
                                                                   .|..|...||
Mouse   400 -------------------------------------------------------SLRNLRVFNL 409

  Fly   682 SSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFP 746
            |||.:        :|:|:                   |:.|:..|:.|:|:|||:||...     
Mouse   410 SSNQL--------LGVPT-------------------GLFDNASSITTIDMSHNQISLCP----- 442

  Fly   747 SHQYIPY---------------NLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGV 796
              |.:|.               :||:|:|....:..| .|..|....|..||:|.|.      ||
Mouse   443 --QMVPVDWEGPPSCVDFRNMGSLRSLSLDGCGLKAL-QDCPFQGTSLTHLDLSSNW------GV 498

  Fly   797 ISNFTS--------LQSL------------DMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYH 841
            ::...|        ||.|            :|.::...||::             ||||.|.:..
Mouse   499 LNGSISPLWAVAPTLQVLSLRDVGLGSGAAEMDFSAFGNLRA-------------LDLSGNSLTS 550

  Fly   842 LPFANLVKVK---SLKYVDLTNNSLEDVPASIVGS--MRNGSQVLLAGNPLHCGCNARPLKYFML 901
            .|     |.|   :|:.:||..|||..:|..:|..  :|....:.|:.||..| |...  .:..|
Mouse   551 FP-----KFKGSLALRTLDLRRNSLTALPQRVVSEQPLRGLQTIYLSQNPYDC-CGVE--GWGAL 607

  Fly   902 QQ---TIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQL 952
            ||   |:|  ||..:.|            :|..:.:...|..:.:.:|..:||:
Mouse   608 QQHFKTVA--DLSMVTC------------NLSSKIVRVVELPEGLPQGCKWEQV 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380 4/12 (33%)
PPP1R42 191..359 CDD:455733 47/175 (27%)
LRR_8 198..258 CDD:404697 19/66 (29%)
leucine-rich repeat 200..223 CDD:275380 7/25 (28%)
leucine-rich repeat 224..271 CDD:275380 14/51 (27%)
leucine-rich repeat 272..295 CDD:275380 9/22 (41%)
leucine-rich repeat 296..319 CDD:275380 7/22 (32%)
leucine-rich repeat 322..343 CDD:275380 7/20 (35%)
leucine-rich repeat 344..367 CDD:275380 0/22 (0%)
LRR 346..718 CDD:443914 71/387 (18%)
leucine-rich repeat 371..390 CDD:275380 8/18 (44%)
leucine-rich repeat 391..414 CDD:275380 8/22 (36%)
leucine-rich repeat 416..438 CDD:275380 1/21 (5%)
leucine-rich repeat 439..462 CDD:275380 1/22 (5%)
leucine-rich repeat 463..486 CDD:275380 7/22 (32%)
leucine-rich repeat 487..510 CDD:275380 7/38 (18%)
leucine-rich repeat 511..534 CDD:275380 7/22 (32%)
leucine-rich repeat 535..554 CDD:275380 7/18 (39%)
leucine-rich repeat 555..578 CDD:275380 4/22 (18%)
leucine-rich repeat 579..603 CDD:275380 11/23 (48%)
leucine-rich repeat 604..627 CDD:275380 0/22 (0%)
leucine-rich repeat 628..649 CDD:275380 0/20 (0%)
PPP1R42 631..849 CDD:455733 48/252 (19%)
leucine-rich repeat 652..672 CDD:275380 0/19 (0%)
leucine-rich repeat 700..726 CDD:275380 2/25 (8%)
leucine-rich repeat 727..745 CDD:275380 7/17 (41%)
leucine-rich repeat 779..802 CDD:275380 7/22 (32%)
leucine-rich repeat 829..852 CDD:275380 8/25 (32%)
NrrosNP_666181.3 LRR 1. /evidence=ECO:0000255 58..79 3/9 (33%)
leucine-rich repeat 60..82 CDD:275380 4/12 (33%)
LRR 2. /evidence=ECO:0000255 82..103 6/20 (30%)
leucine-rich repeat 83..106 CDD:275380 6/22 (27%)
LRR <106..414 CDD:443914 109/486 (22%)
LRR 3. /evidence=ECO:0000255 106..127 6/20 (30%)
leucine-rich repeat 107..133 CDD:275380 9/29 (31%)
LRR 4. /evidence=ECO:0000255 133..155 5/21 (24%)
leucine-rich repeat 134..158 CDD:275380 5/23 (22%)
LRR 5. /evidence=ECO:0000255 158..179 8/20 (40%)
leucine-rich repeat 159..182 CDD:275380 9/22 (41%)
LRR 6. /evidence=ECO:0000255 182..203 7/20 (35%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
LRR 7. /evidence=ECO:0000255 206..227 5/20 (25%)
leucine-rich repeat 207..251 CDD:275380 15/69 (22%)
LRR 8. /evidence=ECO:0000255 228..239 4/36 (11%)
leucine-rich repeat 230..249 CDD:275380 8/44 (18%)
LRR 9. /evidence=ECO:0000255 251..272 10/70 (14%)
leucine-rich repeat 252..273 CDD:275380 10/70 (14%)
LRR 10. /evidence=ECO:0000255 273..294 7/25 (28%)
leucine-rich repeat 274..329 CDD:275380 14/62 (23%)
LRR 276..>595 CDD:443914 102/476 (21%)
LRR 11. /evidence=ECO:0000255 329..350 6/20 (30%)
leucine-rich repeat 330..353 CDD:275380 7/22 (32%)
LRR 12. /evidence=ECO:0000255 353..374 10/34 (29%)
leucine-rich repeat 354..377 CDD:275380 11/42 (26%)
LRR 13. /evidence=ECO:0000255 377..398 9/20 (45%)
leucine-rich repeat 378..403 CDD:275380 12/95 (13%)
LRR 14. /evidence=ECO:0000255 403..424 9/47 (19%)
leucine-rich repeat 404..427 CDD:275380 10/49 (20%)
LRR 15. /evidence=ECO:0000255 427..448 10/27 (37%)
leucine-rich repeat 428..463 CDD:275380 9/41 (22%)
LRR 16. /evidence=ECO:0000255 463..484 7/21 (33%)
leucine-rich repeat 464..486 CDD:275380 7/22 (32%)
LRR 17. /evidence=ECO:0000255 486..507 8/26 (31%)
leucine-rich repeat 487..512 CDD:275380 8/30 (27%)
LRR 18. /evidence=ECO:0000255 512..533 4/20 (20%)
leucine-rich repeat 513..537 CDD:275380 4/23 (17%)
LRR 19. /evidence=ECO:0000255 537..558 10/38 (26%)
leucine-rich repeat 538..559 CDD:275380 9/38 (24%)
LRR 20. /evidence=ECO:0000255 559..580 8/20 (40%)
LRR 21. /evidence=ECO:0000255 585..605 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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