DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and Tlr6

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_030110224.1 Gene:Tlr6 / 21899 MGIID:1341296 Length:806 Species:Mus musculus


Alignment Length:803 Identity:169/803 - (21%)
Similarity:289/803 - (35%) Gaps:249/803 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 KDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTN 427
            |.::.::.|:|.:...::.:..|     :..|.|....:..||..        ....:.|:| .|
Mouse     3 KSLWDSLCNMSQDRKPIVGSFHF-----VCALALIVGSMTPFSNE--------LESMVDYSN-RN 53

  Fly   428 LAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDL 492
            |..:|.......|.|:.|.|||:|:.......|.||..:.:|||.|.|:...||.....|..:|:
Mouse    54 LTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 118

  Fly   493 SHNSMREIKSSTFGTLPTLLEMDLSHN--ELVSVVR--GSLAKLTSL-------RQL-------- 538
            |||.::.|...   .:.:|..:|||.|  :::.|.:  |:|.|||.|       |||        
Mouse   119 SHNRLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL 180

  Fly   539 ------------YLNNNQLEKLFQLP-ISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLG 590
                        ::...:.|.| |:| .::..|.|..|.|.::....  .:|:|.:|.||:.:|.
Mouse   181 HLSCILLDLVSYHIKGGETESL-QIPNTTVLHLVFHPNSLFSVQVNM--SVNALGHLQLSNIKLN 242

  Fly   591 DTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSA-----FGKLP 650
            |    |:...|:..         :|:..:....:..|||  |:|    ||.:.|.     |...|
Mouse   243 D----ENCQRLMTF---------LSELTRGPTLLNVTLQ--HIE----TTWKCSVKLFQFFWPRP 288

  Fly   651 VLFELNLYGNQVKD--------ISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSF 707
            |.: ||:|...:.:        .|:.|.:.|:           |:.::|.:|     |.:.:..:
Mouse   289 VEY-LNIYNLTITERIDREEFTYSETALKSLM-----------IEHVKNQVF-----LFSKEALY 336

  Fly   708 NSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDI 772
            :...:::.|.              ||.:...|:.....||    |.:...||.:.|   :.|..:
Mouse   337 SVFAEMNIKM--------------LSISDTPFIHMVCPPS----PSSFTFLNFTQN---VFTDSV 380

  Fly   773 TFGTKKLVRLDVSHNQINDLRRG-----VISNFTSLQSLDMSYNELSNLKSEEHIFD-------- 824
            ..|...|.||.....|.|.|:..     :..|.:||::||:|.|.|::     |.:|        
Mouse   381 FQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS-----HAYDRTCAWAES 440

  Fly   825 ------------------LPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPA--- 868
                              ||..:..|||.:|:|..:| .::..:::|:.:::.:|||.|:|.   
Mouse   441 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIP-KDVTHLQALQELNVASNSLTDLPGCGA 504

  Fly   869 -------------------SIVGSMRNGSQVLLAGNPLHCGCNARPLKY---FMLQQTIAGEDLK 911
                               ....|.:|...:....||..|.|..|....   ::.::.:.|.. .
Mouse   505 FSSLSVLVIDHNSVSHPSEDFFQSCQNIRSLTAGNNPFQCTCELRDFVKNIGWVAREVVEGWP-D 568

  Fly   912 SIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQLTDVRFREVKTNKAGMLTLC----- 971
            |..|..|...|...|.......|.|           |...||       .|..|.||.|.     
Mouse   569 SYRCDYPESSKGTALRDFHMSPLSC-----------DTVLLT-------VTIGATMLVLAVTGAF 615

  Fly   972 --------WYVSGFSDVS------------------DFHVYIRSSSNDVLHQSDYAYNNRTAQIP 1010
                    |||......:                  .||.::..|.:|            :|.:.
Mouse   616 LCLYFDLPWYVRMLCQWTQTRHRARHIPLEELQRNLQFHAFVSYSEHD------------SAWVK 668

  Fly  1011 VEELSTLGEEKLRGAEICIVSRD 1033
            .|.|..|.::.:|   :|:..|:
Mouse   669 NELLPNLEKDDIR---VCLHERN 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733
LRR_8 198..258 CDD:404697
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380 1/3 (33%)
LRR 346..718 CDD:443914 91/399 (23%)
leucine-rich repeat 371..390 CDD:275380 3/18 (17%)
leucine-rich repeat 391..414 CDD:275380 4/22 (18%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
leucine-rich repeat 439..462 CDD:275380 8/22 (36%)
leucine-rich repeat 463..486 CDD:275380 8/22 (36%)
leucine-rich repeat 487..510 CDD:275380 6/22 (27%)
leucine-rich repeat 511..534 CDD:275380 10/26 (38%)
leucine-rich repeat 535..554 CDD:275380 8/46 (17%)
leucine-rich repeat 555..578 CDD:275380 4/22 (18%)
leucine-rich repeat 579..603 CDD:275380 8/23 (35%)
leucine-rich repeat 604..627 CDD:275380 1/22 (5%)
leucine-rich repeat 628..649 CDD:275380 8/25 (32%)
PPP1R42 631..849 CDD:455733 54/261 (21%)
leucine-rich repeat 652..672 CDD:275380 5/27 (19%)
leucine-rich repeat 700..726 CDD:275380 2/25 (8%)
leucine-rich repeat 727..745 CDD:275380 3/17 (18%)
leucine-rich repeat 779..802 CDD:275380 7/27 (26%)
leucine-rich repeat 829..852 CDD:275380 6/22 (27%)
Tlr6XP_030110224.1 leucine-rich repeat 47..64 CDD:275380 5/17 (29%)
LRR <50..313 CDD:443914 75/289 (26%)
leucine-rich repeat 65..88 CDD:275378 8/22 (36%)
leucine-rich repeat 89..112 CDD:275378 8/22 (36%)
leucine-rich repeat 113..133 CDD:275378 6/22 (27%)
leucine-rich repeat 134..158 CDD:275378 8/23 (35%)
leucine-rich repeat 184..206 CDD:275380 3/22 (14%)
leucine-rich repeat 207..230 CDD:275380 4/24 (17%)
LRR 262..>542 CDD:443914 66/329 (20%)
leucine-rich repeat 290..314 CDD:275380 4/24 (17%)
leucine-rich repeat 315..343 CDD:275380 5/43 (12%)
leucine-rich repeat 344..365 CDD:275380 7/38 (18%)
leucine-rich repeat 390..415 CDD:275380 5/24 (21%)
leucine-rich repeat 416..440 CDD:275380 8/28 (29%)
leucine-rich repeat 441..462 CDD:275380 2/20 (10%)
leucine-rich repeat 463..485 CDD:275380 6/22 (27%)
leucine-rich repeat 486..508 CDD:275380 6/21 (29%)
leucine-rich repeat 510..531 CDD:275380 1/20 (5%)
LRRCT 540..594 CDD:214507 13/65 (20%)
TIR 652..791 CDD:214587 11/52 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.