DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and lron-15

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_495322.3 Gene:lron-15 / 174079 WormBaseID:WBGene00016974 Length:1275 Species:Caenorhabditis elegans


Alignment Length:1226 Identity:261/1226 - (21%)
Similarity:472/1226 - (38%) Gaps:359/1226 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 CECVK----------GSDNGLYIRCENTNLATLSVALQNLASFGMP---IEELTIYRGHFVRLYG 92
            |:|:.          ..::.::|.|.:|:.||: :.|.|..:...|   |..|::..|....:..
 Worm    49 CQCISVPSVTAPGIFSQESPIHIMCHHTSSATV-LQLPNSETMKGPPPHIVALSMTDGSMAFVQQ 112

  Fly    93 PLFAHIKARMLIIEETPLATIEDYVFYGVNNTLEQLHLLRTNLSHVGLLGFGILGKAKELVIDGH 157
            ..|.|...:.|......:.|:....|.|:...|.||.|...|||.:.......|...:.|.::.:
 Worm   113 DAFKHHDIQTLDFSNNQIQTVNVNAFRGLEMKLTQLDLSHNNLSVIPTWALTYLHSLQILHLENN 177

  Fly   158 AFQQLPKDLFAGQEI---------ANSLGII------------------RVT------------- 182
            ....|..:.|...::         .|.|.||                  |:|             
 Worm   178 RIDVLRSNTFDETQLNNLQFLYLDNNQLRIIPNLAFNHLRLVVLMLANNRITEIQKMSLPQTLKF 242

  Fly   183 ----NGNLSDLPIETFQPLRKLKTLDLHG------------------------NQLENLKRNQFK 219
                |..|:.:|......|:.|:::||.|                        |::..|.::.|:
 Worm   243 LVLRNNLLTQIPYVALNDLKTLQSIDLEGNNITHLMDTNEVTFESEMKVILRNNKVRRLDKHSFR 307

  Fly   220 NLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRG---TFARN-SVLKV------ 274
            :.|::..||||:|||:.:|......:..:...::|:|.::.|.||   .||:. ..||:      
 Worm   308 SFRKIRELDISYNQIQTVEDSSFETVGHMQSLDLSYNRIAYLPRGMLKNFAKTLKTLKLAENMIH 372

  Fly   275 --------------LHLSHNQIARLDANSFRGMR-FLRRLFLSDNVLTDIGRGTFGSIARIGTID 324
                          |:|:.|::.|:|.:..:|.. .|..||:::|.|..|..|....:.::..:|
 Worm   373 ATPEALRDLRNLTHLNLNGNKLNRIDGDVLKGCTDTLVELFIANNYLEHIPHGVLSGMKQLEHLD 437

  Fly   325 LARNRLKKIE----------------------------------FQMFTQMNYVEL--------- 346
            :::|::..::                                  |:....:.||::         
 Worm   438 ISKNKIMSLKKPTSLLSITKEETSTVRRLNLAGNRINNMSDYLIFEHMPLLTYVDVSFNRIRFIS 502

  Fly   347 ----------------------------------LDLAENNITKIEKNSFKDIYQ-AIINVSHNA 376
                                              |.|..|.|.||:..|..|:.: ..::::.|.
 Worm   503 PRVFEKLKNLESLFLQNNQLAHFPSLFRLDKLRHLMLDNNQIQKIDNFSLADLPKLQHLSLAGNQ 567

  Fly   377 LELIETAAF--ENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGL 439
            |::|....|  .:...:..|:|:||::.:.|.|||.:.......:||:||:..:..:...|:..|
 Worm   568 LDIITENMFGSSSSSELKSLNLAHNKIHSISSRSFSDLDNLQQLRLSHNNIRTITSMTFSNLRNL 632

  Fly   440 KVLNASYNSITEIPKNCFPKLYELHTIDV---SHNNISSIFNGVFQTLFSLRSIDLSHNSMREIK 501
            :.|:.|:|.|.:|..:.   ||:|..:||   .|||::.|....|::...|:|:.||||:.|...
 Worm   633 RYLDLSHNRIIKILPSA---LYQLPALDVLHLDHNNLNEIDRDAFRSFSDLQSLKLSHNAFRRFS 694

  Fly   502 SSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLE----KLFQLPISLNELYFSH 562
            ....|::..:.::|||.|::..:....:|:  .:|:|.|.:|.:|    ||.|....|..:..||
 Worm   695 CEFLGSISQVHQLDLSSNQINEIDIFCIAR--GIRKLSLASNSVEKINRKLLQDATELTSIDISH 757

  Fly   563 NRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGE------------SFTGLLV----------VQ 605
            |.:.::.|..:.....|.::.||||.:.:...|.            ||..:|.          :.
 Worm   758 NGIIDVDSDAFCECRKLSHIKLSHNYIRNLWKGTFQYQESLHTLDISFNDILFLHQGTFGKNNIL 822

  Fly   606 RLKLQNNGISQPPKDAV-AVMSTLQYLHLENNNITTLERS---AFGKLPVLFELNLYGNQVKDIS 666
            :|.:.||.:|:.|.:|: :.|::|..|.|.:|||..::.|   :||.|.:|...|   |:|..|.
 Worm   823 QLHVNNNKLSRIPLEALSSTMASLHLLDLAHNNIKIVDSSQLTSFGNLSILSFAN---NKVDSIE 884

  Fly   667 KRAFEGLLQLLTLNLSSNGIQT-----------------LQNDIFVGLP-----SLRNLDLSFNS 709
            ..|||.||.|..|:||:|.:.:                 :.|.....:|     |:::|::|.|.
 Worm   885 DGAFENLLSLKILDLSNNPVTSWSPTAFRDLSHSISSINMANTGLFSMPKFSHRSIQSLNISCNK 949

  Fly   710 LTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIP-YNLRNLNLS------------ 761
            :.:|..|.   |..|..:..||:|||.:..::...|.     | .:|:.||:|            
 Worm   950 IYELSEKD---LAPLTKVVALDISHNNLKQISSMAFE-----PLIHLKQLNVSANPITHLTNEHI 1006

  Fly   762 ---YNLMPILTYDITFGTKKLVRLDVSH--NQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEH 821
               |.|..:...|:.|    |:||..||  .|:|:|:...:.|...:.......:.||||.    
 Worm  1007 QQLYKLETLHVSDMPF----LLRLPDSHAFGQMNNLKHFFLYNIPDMARPYQISSILSNLP---- 1063

  Fly   822 IFDLPQNLSWLDLSHNK------------IYHLPFA--NLVKVKSLKY---------VDLTNNSL 863
                |.:..::|:..:.            :.||..|  ||.|::...:         :::.|:|:
 Worm  1064 ----PLHTIYVDIKESALDRQFYTADTRLLRHLVVAGRNLTKIEVGAFATIRGFRVRIEIHNSSI 1124

  Fly   864 EDVPASIVGSMRNGSQVL----------------------------------LAGNPLHCGCNAR 894
            |:.|:.|..:: .|..:|                                  |..||:.|.|..:
 Worm  1125 EEFPSRIFDTL-TGISILSLSLTDNKLTTFNPFQSTVAPAVNQHGTILHSLELKNNPIKCDCQFK 1188

  Fly   895 PLKYFM-----LQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYK 945
            .:..|:     |.......|...:.|.      |.|..:|  |....|.:|...||
 Worm  1189 WMDDFIRVTKFLSDHHISHDFDKVECA------DAQSSNL--ESFASAANELFSYK 1236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 8/22 (36%)
leucine-rich repeat 150..175 CDD:275380 3/33 (9%)
leucine-rich repeat 176..199 CDD:275380 9/57 (16%)
LRR_8 198..258 CDD:290566 18/83 (22%)
leucine-rich repeat 200..223 CDD:275380 7/46 (15%)
LRR_RI 201..545 CDD:238064 100/475 (21%)
leucine-rich repeat 224..271 CDD:275380 15/50 (30%)
LRR_8 245..306 CDD:290566 19/85 (22%)
leucine-rich repeat 272..295 CDD:275380 8/43 (19%)
LRR_8 296..354 CDD:290566 15/134 (11%)
leucine-rich repeat 296..319 CDD:275380 7/22 (32%)
LRR_8 322..401 CDD:290566 21/158 (13%)
leucine-rich repeat 322..343 CDD:275380 3/54 (6%)
leucine-rich repeat 344..367 CDD:275380 9/65 (14%)
leucine-rich repeat 371..390 CDD:275380 4/20 (20%)
leucine-rich repeat 391..414 CDD:275380 8/22 (36%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
LRR_8 437..495 CDD:290566 20/60 (33%)
leucine-rich repeat 439..462 CDD:275380 7/22 (32%)
leucine-rich repeat 463..486 CDD:275380 8/25 (32%)
LRR_RI 486..738 CDD:238064 82/303 (27%)
LRR_8 486..545 CDD:290566 17/58 (29%)
leucine-rich repeat 487..510 CDD:275380 8/22 (36%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..554 CDD:275380 8/22 (36%)
LRR_8 554..614 CDD:290566 17/81 (21%)
leucine-rich repeat 555..578 CDD:275380 5/22 (23%)
leucine-rich repeat 579..603 CDD:275380 8/35 (23%)
leucine-rich repeat 604..627 CDD:275380 7/23 (30%)
LRR_8 626..710 CDD:290566 31/108 (29%)
leucine-rich repeat 628..649 CDD:275380 9/23 (39%)
leucine-rich repeat 652..672 CDD:275380 7/19 (37%)
LRR_8 698..765 CDD:290566 21/87 (24%)
leucine-rich repeat 700..726 CDD:275380 7/25 (28%)
leucine-rich repeat 727..745 CDD:275380 5/17 (29%)
LRR_8 777..839 CDD:290566 15/75 (20%)
leucine-rich repeat 779..802 CDD:275380 9/24 (38%)
leucine-rich repeat 829..852 CDD:275380 7/36 (19%)
lron-15NP_495322.3 LRR_8 95..155 CDD:290566 13/59 (22%)
leucine-rich repeat 120..144 CDD:275380 4/23 (17%)
LRR_RI <144..348 CDD:238064 39/203 (19%)
LRR_8 144..205 CDD:290566 12/60 (20%)
leucine-rich repeat 145..168 CDD:275380 8/22 (36%)
leucine-rich repeat 169..194 CDD:275380 3/24 (13%)
leucine-rich repeat 195..217 CDD:275380 4/21 (19%)
LRR_8 217..274 CDD:290566 10/56 (18%)
leucine-rich repeat 218..239 CDD:275380 2/20 (10%)
leucine-rich repeat 240..263 CDD:275380 4/22 (18%)
leucine-rich repeat 264..311 CDD:275380 7/46 (15%)
LRR_8 289..346 CDD:290566 14/56 (25%)
leucine-rich repeat 312..335 CDD:275380 8/22 (36%)
leucine-rich repeat 336..356 CDD:275380 5/19 (26%)
LRR_RI <338..498 CDD:238064 27/159 (17%)
leucine-rich repeat 361..383 CDD:275380 2/21 (10%)
leucine-rich repeat 384..405 CDD:275380 5/20 (25%)
LRR_8 408..473 CDD:290566 9/64 (14%)
leucine-rich repeat 409..432 CDD:275380 7/22 (32%)
leucine-rich repeat 433..462 CDD:275380 2/28 (7%)
LRR_8 461..522 CDD:290566 3/60 (5%)
leucine-rich repeat 463..487 CDD:275380 1/23 (4%)
leucine-rich repeat 488..511 CDD:275380 2/22 (9%)
LRR_8 510..568 CDD:290566 9/57 (16%)
LRR_4 510..551 CDD:289563 6/40 (15%)
leucine-rich repeat 512..533 CDD:275380 0/20 (0%)
LRR_4 533..573 CDD:289563 11/39 (28%)
leucine-rich repeat 534..557 CDD:275380 8/22 (36%)
leucine-rich repeat 558..581 CDD:275380 4/22 (18%)
LRR_8 583..642 CDD:290566 17/58 (29%)
leucine-rich repeat 584..607 CDD:275380 8/22 (36%)
LRR_RI <607..799 CDD:238064 53/196 (27%)
leucine-rich repeat 608..631 CDD:275380 5/22 (23%)
LRR_8 630..688 CDD:290566 20/60 (33%)
leucine-rich repeat 632..655 CDD:275380 9/25 (36%)
leucine-rich repeat 656..676 CDD:275380 7/19 (37%)
leucine-rich repeat 680..703 CDD:275380 8/22 (36%)
leucine-rich repeat 704..749 CDD:275380 13/46 (28%)
leucine-rich repeat 726..739 CDD:275378 5/12 (42%)
LRR_8 748..808 CDD:290566 13/59 (22%)
leucine-rich repeat 750..771 CDD:275380 5/20 (25%)
leucine-rich repeat 774..797 CDD:275380 6/22 (27%)
LRR_8 797..856 CDD:290566 14/58 (24%)
LRR_RI <798..982 CDD:238064 50/189 (26%)
leucine-rich repeat 798..845 CDD:275380 10/46 (22%)
LRR_8 845..904 CDD:290566 25/61 (41%)
leucine-rich repeat 846..869 CDD:275380 8/22 (36%)
leucine-rich repeat 870..893 CDD:275380 10/25 (40%)
leucine-rich repeat 894..915 CDD:275380 5/20 (25%)
LRR_8 938..998 CDD:290566 19/67 (28%)
leucine-rich repeat 940..963 CDD:275380 7/25 (28%)
leucine-rich repeat 964..987 CDD:275380 7/27 (26%)
leucine-rich repeat 988..1009 CDD:275380 4/20 (20%)
leucine-rich repeat 1038..1064 CDD:275380 6/33 (18%)
leucine-rich repeat 1113..1139 CDD:275380 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4879
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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